| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is glpE [C]
Identifier: 113969729
GI number: 113969729
Start: 1614698
End: 1615057
Strand: Direct
Name: glpE [C]
Synonym: Shewmr4_1387
Alternate gene names: 113969729
Gene position: 1614698-1615057 (Clockwise)
Preceding gene: 113969728
Following gene: 113969730
Centisome position: 34.31
GC content: 52.78
Gene sequence:
>360_bases ATGAATCCATCCAGTGCTTTTTCAGCCCTTGTCGAATCGATTCGACCCCATGTCGTTGAAGTGAGTATTGAGGCCTACCA AGCCGATGACACTTGGGTATTGATTGATGTCCGTGAAGATAACGAGTGGCTACAGGATCATCTGCCGCAGGCGAAACATA TGAGCCGCGGCATTATTGAGCGCGATATTGAACAGCGCTTCCCCGATAAACATACGCCTCTGCTGCTCTATTGCGCGGGC GGCGCACGCTCTGTACTGGCGGCCAGCAGTTTGCAACTGATGGGTTACCAAAGGGTGGCCTCCTTGATTGGGGGTTATAA AGGCTGGATCCAACGCCAGCTGCCCGTGGTGCAAGATTAA
Upstream 100 bases:
>100_bases TACACGCCGTTAATGGCAATGATTGCGTCTCCCCCAGTAGCGAATTACACTTCAACTTATATTCGTTAAGTCATTCAATC CCTTATCTAAGGAGTCTCTG
Downstream 100 bases:
>100_bases TTTAGGCTGGGTTTAACTTTTTATAGGCGAGTCACATGCAATACTTCCCGCTGTTTATTGATACTGTTAATTTAAATGTC CTGCTGGTGGGAGCGGGTGA
Product: rhodanese domain-containing protein
Products: H+; Sulfite; Thiocyanate [C]
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Molybdopterin Biosynthesis Protein; Molybdopterin Biosynthesis Protein MoeB; Rhodanese-Like Domain-Containing Protein; Rhodanese-Related Sulfurtransferase; Thiosulfate Sulfurtransferase; Molybdopterin Biosynthesis MoeB Protein; Rhodanese-Like Family Protein; Thiosulfate Sulfurtransferase GlpE; Rhodanese-Like Domain Protein; Metallo-Beta-Lactamase Superfamily Protein; Rhodanese/Sulfurtransferase-Like Protein; Rhodanese/Moeb/Thif Domain Protein
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MNPSSAFSALVESIRPHVVEVSIEAYQADDTWVLIDVREDNEWLQDHLPQAKHMSRGIIERDIEQRFPDKHTPLLLYCAG GARSVLAASSLQLMGYQRVASLIGGYKGWIQRQLPVVQD
Sequences:
>Translated_119_residues MNPSSAFSALVESIRPHVVEVSIEAYQADDTWVLIDVREDNEWLQDHLPQAKHMSRGIIERDIEQRFPDKHTPLLLYCAG GARSVLAASSLQLMGYQRVASLIGGYKGWIQRQLPVVQD >Mature_119_residues MNPSSAFSALVESIRPHVVEVSIEAYQADDTWVLIDVREDNEWLQDHLPQAKHMSRGIIERDIEQRFPDKHTPLLLYCAG GARSVLAASSLQLMGYQRVASLIGGYKGWIQRQLPVVQD
Specific function: Catalyzes, Although With Low Efficiency, The Sulfur Transfer Reaction From Thiosulfate To Cyanide. The Relatively Low Affinity Of Glpe For Both Thiosulfate And Cyanide Suggests That These Compounds Are Not The Physiological Substrates. Thioredoxin 1 Or Re
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.8.1.1 [C]
Molecular weight: Translated: 13429; Mature: 13429
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSSAFSALVESIRPHVVEVSIEAYQADDTWVLIDVREDNEWLQDHLPQAKHMSRGIIE CCCHHHHHHHHHHHCCEEEEEEEEEEECCCCEEEEEEECCCHHHHHCCCHHHHHHHHHHH RDIEQRFPDKHTPLLLYCAGGARSVLAASSLQLMGYQRVASLIGGYKGWIQRQLPVVQD HHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCC >Mature Secondary Structure MNPSSAFSALVESIRPHVVEVSIEAYQADDTWVLIDVREDNEWLQDHLPQAKHMSRGIIE CCCHHHHHHHHHHHCCEEEEEEEEEEECCCCEEEEEEECCCHHHHHCCCHHHHHHHHHHH RDIEQRFPDKHTPLLLYCAGGARSVLAASSLQLMGYQRVASLIGGYKGWIQRQLPVVQD HHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Cyanide; Thiosulfate [C]
Specific reaction: Cyanide + Thiosulfate --> H+ + Sulfite + Thiocyanate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA