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The map label for this gene is 113969696

Identifier: 113969696

GI number: 113969696

Start: 1569781

End: 1571349

Strand: Direct

Name: 113969696

Synonym: Shewmr4_1354

Alternate gene names: NA

Gene position: 1569781-1571349 (Clockwise)

Preceding gene: 113969695

Following gene: 113969699

Centisome position: 33.35

GC content: 45.7

Gene sequence:

>1569_bases
ATGACTGTAGTAAGTTACGCCGATTCGGCACTTTCTCTGCTGCCGCCTGTGGTCGCAATTGTGTTGGCGATTTTCACTCG
CCGCGTTCTCCTTTCCCTCGGTTTAGGTATTGTGATTGGGGTATTATTACTCAATCAATTTTCACCTGTGGCCAGCGGTG
AGTTTTTAGTTAACAGTGTAAAAGGACTTTTTTGGTCAGAAGATGGCGTAAATTCTTGGAATTTATACATTCTCGGCTTT
TTAATTGTATTAGGGATGATCACTGCGTTAATTACCGTCAGTGGTAGTGCGCGGGCATTTGCCGATTGGGCGCGCCTGCA
TATTCGCAATAAACGCGATGCCAAATTACTGACCATGTTTTTAGGCTGTGTTGTCTTTATTGACGATTATTTCAATAGCT
TAGTCGTTGGTTCTGTCGCAAGACCCGTCACCGACCGTTATTATATTTCCCGCGCTAAGTTAGCCTATTTATTAGATTCT
ACGGCGGCGCCGGTTTGTGTTATTTCGCCAGTATCCAGTTGGGGCGCTTATATTATTGCGCTGATCGGCGGCATATTAAC
CGCCCATGGCTTTGCCGATTCTGGGCATTTGAGTGTATTTATTCAAATGATCCCTATGAATTTCTACGCTATTTTTTCTT
TATTATTATTACTTTGTGTTGCATTTATGGGCTTGGATATTGGCCCTATGCGTGAGCATGAATTAAATGCACAGCGCGGT
AATTTATATGATGAGAATAAAGGATTACCACCCGGGGCGAATGCCGATCTACCCGAAGCCGAAACGGGTAAAATCCTCGG
GTTATTCTTACCTATTACCGTGCTGGTATTTGCGACCCTGTATTTTATGATCGATAGTGGTGCTCAGGTATTAGCGAAAG
AAGGCATTGAATTTAATATTATTTCCGCTTTTGAGAAAACCGATGTCAGTTCATCACTGTTCTTTGGTGCCCTGATTGGT
TTAGCGGTTGCACTGGTGCTTAACCTAGTGCAAGGCGTTGAAAAGTCGATGGTTGTTAAAGGTATAGTGCAGGGCGCTCG
CTCTATGCTGCCTGCGATTTATATCCTGTTATTTGCATGGACTATTGCTGGTGTGATTGGCCAGCTTGAAACTGGTAAGT
TTATGGCAAGCCTCGCCACAGGGAATATTCCCTTTGCCTTCTTGCCTGCGTTGATGTTTGTGTTAGCGGGTCTAACGGCG
TTTTCTACCGGCACCAGTTGGGGCACGTTCGGCATTATGCTGCCGATTGCCGCCGATATGGCGATGGGTAGCCATACGGC
CATGATGTTACCTATGCTAGCTTCAGTATTGGCGGGCGCGGTATTTGGTGATCACTGTTCACCGATTTCGGATACCACGA
TTTTGTCGTCAACCGGCGCGAGCTGCCACCATATCGACCACGTTGTGACTCAGCTGCCTTACGCAGTGATAGTGGCGCTG
ATCAGCATGGTGGGTTATGTGGTGCTTGGCTTTACTGAATCAGTCAATGCGGGGCTGCTGACCTGTAGTGTATTGTTTGT
GTTGACTATCATTGGTTTGCAAATTAAATCAAGAAGTTTGGCGAAATAA

Upstream 100 bases:

>100_bases
CTATGGAGCGCTACTGATAGGACAGGTGATCTTGGGTATCTATTGCCTTTTCCCACCAGTTCAGTCGCCCTCCATTCGTA
TTTTGACGAAGAAATAATCA

Downstream 100 bases:

>100_bases
ACCGTAATTAAGAGAATGACAACTCTGCGGTTCGTAAGGTGAATTTCGCGAGAGTTAAAAATAAAATAGGCCAGCAAGTA
TGCTGGCCTATTTTTTTATT

Product: Na+/H+ antiporter NhaC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 521

Protein sequence:

>522_residues
MTVVSYADSALSLLPPVVAIVLAIFTRRVLLSLGLGIVIGVLLLNQFSPVASGEFLVNSVKGLFWSEDGVNSWNLYILGF
LIVLGMITALITVSGSARAFADWARLHIRNKRDAKLLTMFLGCVVFIDDYFNSLVVGSVARPVTDRYYISRAKLAYLLDS
TAAPVCVISPVSSWGAYIIALIGGILTAHGFADSGHLSVFIQMIPMNFYAIFSLLLLLCVAFMGLDIGPMREHELNAQRG
NLYDENKGLPPGANADLPEAETGKILGLFLPITVLVFATLYFMIDSGAQVLAKEGIEFNIISAFEKTDVSSSLFFGALIG
LAVALVLNLVQGVEKSMVVKGIVQGARSMLPAIYILLFAWTIAGVIGQLETGKFMASLATGNIPFAFLPALMFVLAGLTA
FSTGTSWGTFGIMLPIAADMAMGSHTAMMLPMLASVLAGAVFGDHCSPISDTTILSSTGASCHHIDHVVTQLPYAVIVAL
ISMVGYVVLGFTESVNAGLLTCSVLFVLTIIGLQIKSRSLAK

Sequences:

>Translated_522_residues
MTVVSYADSALSLLPPVVAIVLAIFTRRVLLSLGLGIVIGVLLLNQFSPVASGEFLVNSVKGLFWSEDGVNSWNLYILGF
LIVLGMITALITVSGSARAFADWARLHIRNKRDAKLLTMFLGCVVFIDDYFNSLVVGSVARPVTDRYYISRAKLAYLLDS
TAAPVCVISPVSSWGAYIIALIGGILTAHGFADSGHLSVFIQMIPMNFYAIFSLLLLLCVAFMGLDIGPMREHELNAQRG
NLYDENKGLPPGANADLPEAETGKILGLFLPITVLVFATLYFMIDSGAQVLAKEGIEFNIISAFEKTDVSSSLFFGALIG
LAVALVLNLVQGVEKSMVVKGIVQGARSMLPAIYILLFAWTIAGVIGQLETGKFMASLATGNIPFAFLPALMFVLAGLTA
FSTGTSWGTFGIMLPIAADMAMGSHTAMMLPMLASVLAGAVFGDHCSPISDTTILSSTGASCHHIDHVVTQLPYAVIVAL
ISMVGYVVLGFTESVNAGLLTCSVLFVLTIIGLQIKSRSLAK
>Mature_521_residues
TVVSYADSALSLLPPVVAIVLAIFTRRVLLSLGLGIVIGVLLLNQFSPVASGEFLVNSVKGLFWSEDGVNSWNLYILGFL
IVLGMITALITVSGSARAFADWARLHIRNKRDAKLLTMFLGCVVFIDDYFNSLVVGSVARPVTDRYYISRAKLAYLLDST
AAPVCVISPVSSWGAYIIALIGGILTAHGFADSGHLSVFIQMIPMNFYAIFSLLLLLCVAFMGLDIGPMREHELNAQRGN
LYDENKGLPPGANADLPEAETGKILGLFLPITVLVFATLYFMIDSGAQVLAKEGIEFNIISAFEKTDVSSSLFFGALIGL
AVALVLNLVQGVEKSMVVKGIVQGARSMLPAIYILLFAWTIAGVIGQLETGKFMASLATGNIPFAFLPALMFVLAGLTAF
STGTSWGTFGIMLPIAADMAMGSHTAMMLPMLASVLAGAVFGDHCSPISDTTILSSTGASCHHIDHVVTQLPYAVIVALI
SMVGYVVLGFTESVNAGLLTCSVLFVLTIIGLQIKSRSLAK

Specific function: Unknown

COG id: COG1757

COG function: function code C; Na+/H+ antiporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 55527; Mature: 55395

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVVSYADSALSLLPPVVAIVLAIFTRRVLLSLGLGIVIGVLLLNQFSPVASGEFLVNSV
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
KGLFWSEDGVNSWNLYILGFLIVLGMITALITVSGSARAFADWARLHIRNKRDAKLLTMF
HHCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHH
LGCVVFIDDYFNSLVVGSVARPVTDRYYISRAKLAYLLDSTAAPVCVISPVSSWGAYIIA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHH
LIGGILTAHGFADSGHLSVFIQMIPMNFYAIFSLLLLLCVAFMGLDIGPMREHELNAQRG
HHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCC
NLYDENKGLPPGANADLPEAETGKILGLFLPITVLVFATLYFMIDSGAQVLAKEGIEFNI
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEE
ISAFEKTDVSSSLFFGALIGLAVALVLNLVQGVEKSMVVKGIVQGARSMLPAIYILLFAW
EHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIAGVIGQLETGKFMASLATGNIPFAFLPALMFVLAGLTAFSTGTSWGTFGIMLPIAADM
HHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
AMGSHTAMMLPMLASVLAGAVFGDHCSPISDTTILSSTGASCHHIDHVVTQLPYAVIVAL
HCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCHHHHHHH
ISMVGYVVLGFTESVNAGLLTCSVLFVLTIIGLQIKSRSLAK
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TVVSYADSALSLLPPVVAIVLAIFTRRVLLSLGLGIVIGVLLLNQFSPVASGEFLVNSV
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
KGLFWSEDGVNSWNLYILGFLIVLGMITALITVSGSARAFADWARLHIRNKRDAKLLTMF
HHCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHH
LGCVVFIDDYFNSLVVGSVARPVTDRYYISRAKLAYLLDSTAAPVCVISPVSSWGAYIIA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHH
LIGGILTAHGFADSGHLSVFIQMIPMNFYAIFSLLLLLCVAFMGLDIGPMREHELNAQRG
HHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCC
NLYDENKGLPPGANADLPEAETGKILGLFLPITVLVFATLYFMIDSGAQVLAKEGIEFNI
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEE
ISAFEKTDVSSSLFFGALIGLAVALVLNLVQGVEKSMVVKGIVQGARSMLPAIYILLFAW
EHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIAGVIGQLETGKFMASLATGNIPFAFLPALMFVLAGLTAFSTGTSWGTFGIMLPIAADM
HHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
AMGSHTAMMLPMLASVLAGAVFGDHCSPISDTTILSSTGASCHHIDHVVTQLPYAVIVAL
HCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCHHHHHHH
ISMVGYVVLGFTESVNAGLLTCSVLFVLTIIGLQIKSRSLAK
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]