Click here to switch to the map view.

The map label for this gene is fliQ [H]

Identifier: 113969636

GI number: 113969636

Start: 1499845

End: 1500114

Strand: Direct

Name: fliQ [H]

Synonym: Shewmr4_1293

Alternate gene names: 113969636

Gene position: 1499845-1500114 (Clockwise)

Preceding gene: 113969635

Following gene: 113969637

Centisome position: 31.87

GC content: 49.26

Gene sequence:

>270_bases
ATGACGCCAGAAGCCCTAATCGATATTTTCCGTGAAGCCTTAGCCGTGATTGTCATGATGGTTTCGGCCATCGTGCTGCC
AGGGCTTGGTATTGGCCTCATTGTGGCGGTGTTCCAAGCCGCGACCTCAATTAACGAACAGACTTTAAGCTTTTTGCCTC
GACTGATCGTGACCTTACTGGCCTTGATGGTTATGGGACACTGGTTAGTGCAAACCCTCATGGATTTCTTTATCGAAATG
GTTAACCGCATTCCCCAAGTGGTGGGCTAA

Upstream 100 bases:

>100_bases
CTTTACCCTTCAAGATCATGTTGTTTGTGCTTGTCGATGGTTGGGGCCTAGTGATGGGCACTTTAGCCAATAGCTTTGGT
TAGATGAGCGGAGATTCGCG

Downstream 100 bases:

>100_bases
GCCCATGGAGCTGCTGCTCGACACCTTAATGCAAACCATCGCCTCTTATATGTGGCCATTGTTTCGCGTGACCAGCATGC
TGATGGTCATGGTGGTGTTT

Product: flagellar biosynthetic protein FliQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MTPEALIDIFREALAVIVMMVSAIVLPGLGIGLIVAVFQAATSINEQTLSFLPRLIVTLLALMVMGHWLVQTLMDFFIEM
VNRIPQVVG

Sequences:

>Translated_89_residues
MTPEALIDIFREALAVIVMMVSAIVLPGLGIGLIVAVFQAATSINEQTLSFLPRLIVTLLALMVMGHWLVQTLMDFFIEM
VNRIPQVVG
>Mature_88_residues
TPEALIDIFREALAVIVMMVSAIVLPGLGIGLIVAVFQAATSINEQTLSFLPRLIVTLLALMVMGHWLVQTLMDFFIEMV
NRIPQVVG

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1987

COG function: function code NU; Flagellar biosynthesis pathway, component FliQ

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002191
- InterPro:   IPR006305 [H]

Pfam domain/function: PF01313 Bac_export_3 [H]

EC number: NA

Molecular weight: Translated: 9753; Mature: 9622

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.9 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPEALIDIFREALAVIVMMVSAIVLPGLGIGLIVAVFQAATSINEQTLSFLPRLIVTLL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALMVMGHWLVQTLMDFFIEMVNRIPQVVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TPEALIDIFREALAVIVMMVSAIVLPGLGIGLIVAVFQAATSINEQTLSFLPRLIVTLL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALMVMGHWLVQTLMDFFIEMVNRIPQVVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]