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The map label for this gene is fliP [H]

Identifier: 113969635

GI number: 113969635

Start: 1499081

End: 1499827

Strand: Direct

Name: fliP [H]

Synonym: Shewmr4_1292

Alternate gene names: 113969635

Gene position: 1499081-1499827 (Clockwise)

Preceding gene: 113969634

Following gene: 113969636

Centisome position: 31.85

GC content: 46.32

Gene sequence:

>747_bases
ATGATGAAGTACATACTCACCTTGATAGGGGTTAGTACCCTGTTGTTTGCCGCATCGGTGGGCGCGGCCGATGGTGTACT
GCCGGCGGTAACCGTAAAAACCGCTGCCGATGGTTCGACCGAATATTCGGTGACCATGCAGATCCTATTACTAATGACCT
CGCTGAGCTTTATCCCTGCGATGGTCATTATGTTGACGTCATTTACCCGCATCATAGTGGTGCTCTCGATTTTGCGCCAA
GCCATTGGTTTACAACAGACACCTTCTAACCAAGTCTTGATTGGCATGAGCCTGTTTATGACCTTTTTCATTATGGCGCC
AGTGTTCGACAAAATTTATGACCAAGGGGTTAAGCCTTATATTGATGAACAGCTCACGCTACAACAGGCCTTCGATAAGG
GCAAAGAGCCATTACGGGCATTTATGTTAGGGCAGGTGCGTACCACAGATCTGAAAACCTTTATCGATATTTCGGGGTAT
CAAAACATTAATTCCCCAGAAGAAGCGCCAATGAGCGTGTTGGTGCCAGCTTTTATCACCAGTGAACTAAAAACCGCCTT
TCAAATTGGCTTTATGTTGTTTGTGCCTTTTTTAGTGCTAGATCTCGTGGTGGCCAGTATCTTGATGGCCATGGGTATGA
TGATGCTCTCGCCGATGATTGTTTCTTTACCCTTCAAGATCATGTTGTTTGTGCTTGTCGATGGTTGGGGCCTAGTGATG
GGCACTTTAGCCAATAGCTTTGGTTAG

Upstream 100 bases:

>100_bases
TTAGCGGGCAACAAGTTAATTTAATTGATAAATTAGCTGAGCCAATCCAAATTGAGTCCGTTTCCTTTGCGGACAAGCTA
CGGCAGGCGAAATTAAAACA

Downstream 100 bases:

>100_bases
ATGAGCGGAGATTCGCGATGACGCCAGAAGCCCTAATCGATATTTTCCGTGAAGCCTTAGCCGTGATTGTCATGATGGTT
TCGGCCATCGTGCTGCCAGG

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MMKYILTLIGVSTLLFAASVGAADGVLPAVTVKTAADGSTEYSVTMQILLLMTSLSFIPAMVIMLTSFTRIIVVLSILRQ
AIGLQQTPSNQVLIGMSLFMTFFIMAPVFDKIYDQGVKPYIDEQLTLQQAFDKGKEPLRAFMLGQVRTTDLKTFIDISGY
QNINSPEEAPMSVLVPAFITSELKTAFQIGFMLFVPFLVLDLVVASILMAMGMMMLSPMIVSLPFKIMLFVLVDGWGLVM
GTLANSFG

Sequences:

>Translated_248_residues
MMKYILTLIGVSTLLFAASVGAADGVLPAVTVKTAADGSTEYSVTMQILLLMTSLSFIPAMVIMLTSFTRIIVVLSILRQ
AIGLQQTPSNQVLIGMSLFMTFFIMAPVFDKIYDQGVKPYIDEQLTLQQAFDKGKEPLRAFMLGQVRTTDLKTFIDISGY
QNINSPEEAPMSVLVPAFITSELKTAFQIGFMLFVPFLVLDLVVASILMAMGMMMLSPMIVSLPFKIMLFVLVDGWGLVM
GTLANSFG
>Mature_248_residues
MMKYILTLIGVSTLLFAASVGAADGVLPAVTVKTAADGSTEYSVTMQILLLMTSLSFIPAMVIMLTSFTRIIVVLSILRQ
AIGLQQTPSNQVLIGMSLFMTFFIMAPVFDKIYDQGVKPYIDEQLTLQQAFDKGKEPLRAFMLGQVRTTDLKTFIDISGY
QNINSPEEAPMSVLVPAFITSELKTAFQIGFMLFVPFLVLDLVVASILMAMGMMMLSPMIVSLPFKIMLFVLVDGWGLVM
GTLANSFG

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=221, Percent_Identity=53.393665158371, Blast_Score=258, Evalue=4e-70,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27127; Mature: 27127

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.1 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.1 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCC
>Mature Secondary Structure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HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]