Click here to switch to the map view.

The map label for this gene is fliH [H]

Identifier: 113969627

GI number: 113969627

Start: 1491956

End: 1492906

Strand: Direct

Name: fliH [H]

Synonym: Shewmr4_1284

Alternate gene names: 113969627

Gene position: 1491956-1492906 (Clockwise)

Preceding gene: 113969626

Following gene: 113969628

Centisome position: 31.7

GC content: 48.58

Gene sequence:

>951_bases
ATGAGTTCCTCTAATCGGAGTGACAATAGCGACAATAAATTGTCCCATAGGGTGGTGAGTGACTCTGAAATTGAGTTCAG
CCATTGGCAATTACCCGATGTCACTGAAACCGAAGAGGCGAGTATTTCTAACCTGTTTGGTTATTCTGCCCAGCAGCATG
CGCCCAAGGCGGTGGCAGCCGAAACTATTGCGCCACCCACCATGGCGGAAATTGAAGATATTCGCGCCCAGGCTGAAGAA
GAAGGCTTTAACGAAGGTAAGACGCAAGGTTATGCCGAAGGGCTAGAGCAGGGCAGACTCGAGGGGCTGGAGCAAGGTCA
TACCGAGGGCCTAGTCCAAGGCCATGAGCAAGGGCTCGAGGCAGGGCTTGCCGAAGCTAAAACCTTAATCCAACGCTTTG
AAGGGCTGTTAAGTCAATTTGAAAAGCCTTTGCAATTACTCGATGGCGATATTGAACATTCCTTAATGACACTCACTATG
GCGCTGGCTAAATCTGTGATTGGTCATGAACTTAAAACTCATCCTGAACAAATCCTGTCGGCGCTACGTTTAGGGGTTGA
ATCTCTGCCAATCAAGGAGCAAAGCGTCAGTATTCGCATGCATCCCGATGATGTTGCCTTGGTGGAACAGTTATATACCA
GTACTCAATTGAACCGTAACCAATGGCAATTAGAGGCCGAACCTAGCTTAAATCCGGGGGATTGTATTATCAGCAGCCAA
CGTTCGTTGGTGGATTTAACTCTTTCCTCACGCATCGATACTGTGTTTGAGTCATTACGTAATCAACAATCCCATTTAAG
TCATCAGCAGCAACAGCGTCAAGCGGTCCTCGACGAGGAGAATGCCGCTAAAATCGTCTCAGCCGCAGAACTTGCTGAAG
CGGCGCAAAGTCCCCAACCCCAAGATGATGGAGAGCAAGATGCTAAATCGCCGCCATCAACTGCTGAATAA

Upstream 100 bases:

>100_bases
ATCCGGATCAGCGAAGTGGAAATCGCTCAAAAAGAAATTCTGTCAATTGCGCGTCGTTTAAGTGACAGCGGTGAAATCAT
GTTAGGCGGCGGTGGCGGCG

Downstream 100 bases:

>100_bases
ACTGAATCACTGCATCGACAAAGTCCCGCCGTTTCGAGCTATCGCCAGTGGTCAATTGGTGCGCGTGGTTGGTTTAACCT
TAGAGGCGAGTGGTTGTCGC

Product: flagellar assembly protein H

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSSSNRSDNSDNKLSHRVVSDSEIEFSHWQLPDVTETEEASISNLFGYSAQQHAPKAVAAETIAPPTMAEIEDIRAQAEE
EGFNEGKTQGYAEGLEQGRLEGLEQGHTEGLVQGHEQGLEAGLAEAKTLIQRFEGLLSQFEKPLQLLDGDIEHSLMTLTM
ALAKSVIGHELKTHPEQILSALRLGVESLPIKEQSVSIRMHPDDVALVEQLYTSTQLNRNQWQLEAEPSLNPGDCIISSQ
RSLVDLTLSSRIDTVFESLRNQQSHLSHQQQQRQAVLDEENAAKIVSAAELAEAAQSPQPQDDGEQDAKSPPSTAE

Sequences:

>Translated_316_residues
MSSSNRSDNSDNKLSHRVVSDSEIEFSHWQLPDVTETEEASISNLFGYSAQQHAPKAVAAETIAPPTMAEIEDIRAQAEE
EGFNEGKTQGYAEGLEQGRLEGLEQGHTEGLVQGHEQGLEAGLAEAKTLIQRFEGLLSQFEKPLQLLDGDIEHSLMTLTM
ALAKSVIGHELKTHPEQILSALRLGVESLPIKEQSVSIRMHPDDVALVEQLYTSTQLNRNQWQLEAEPSLNPGDCIISSQ
RSLVDLTLSSRIDTVFESLRNQQSHLSHQQQQRQAVLDEENAAKIVSAAELAEAAQSPQPQDDGEQDAKSPPSTAE
>Mature_315_residues
SSSNRSDNSDNKLSHRVVSDSEIEFSHWQLPDVTETEEASISNLFGYSAQQHAPKAVAAETIAPPTMAEIEDIRAQAEEE
GFNEGKTQGYAEGLEQGRLEGLEQGHTEGLVQGHEQGLEAGLAEAKTLIQRFEGLLSQFEKPLQLLDGDIEHSLMTLTMA
LAKSVIGHELKTHPEQILSALRLGVESLPIKEQSVSIRMHPDDVALVEQLYTSTQLNRNQWQLEAEPSLNPGDCIISSQR
SLVDLTLSSRIDTVFESLRNQQSHLSHQQQQRQAVLDEENAAKIVSAAELAEAAQSPQPQDDGEQDAKSPPSTAE

Specific function: Needed for flagellar regrowth and assembly [H]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliH family [H]

Homologues:

Organism=Escherichia coli, GI87082004, Length=163, Percent_Identity=31.2883435582822, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000563
- InterPro:   IPR018035 [H]

Pfam domain/function: PF02108 FliH [H]

EC number: NA

Molecular weight: Translated: 34675; Mature: 34543

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSNRSDNSDNKLSHRVVSDSEIEFSHWQLPDVTETEEASISNLFGYSAQQHAPKAVAA
CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCHHHHH
ETIAPPTMAEIEDIRAQAEEEGFNEGKTQGYAEGLEQGRLEGLEQGHTEGLVQGHEQGLE
HHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AGLAEAKTLIQRFEGLLSQFEKPLQLLDGDIEHSLMTLTMALAKSVIGHELKTHPEQILS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ALRLGVESLPIKEQSVSIRMHPDDVALVEQLYTSTQLNRNQWQLEAEPSLNPGDCIISSQ
HHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEECCC
RSLVDLTLSSRIDTVFESLRNQQSHLSHQQQQRQAVLDEENAAKIVSAAELAEAAQSPQP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
QDDGEQDAKSPPSTAE
CCCCCHHCCCCCCCCC
>Mature Secondary Structure 
SSSNRSDNSDNKLSHRVVSDSEIEFSHWQLPDVTETEEASISNLFGYSAQQHAPKAVAA
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCHHHHH
ETIAPPTMAEIEDIRAQAEEEGFNEGKTQGYAEGLEQGRLEGLEQGHTEGLVQGHEQGLE
HHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AGLAEAKTLIQRFEGLLSQFEKPLQLLDGDIEHSLMTLTMALAKSVIGHELKTHPEQILS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ALRLGVESLPIKEQSVSIRMHPDDVALVEQLYTSTQLNRNQWQLEAEPSLNPGDCIISSQ
HHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEECCC
RSLVDLTLSSRIDTVFESLRNQQSHLSHQQQQRQAVLDEENAAKIVSAAELAEAAQSPQP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
QDDGEQDAKSPPSTAE
CCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 8224881 [H]