| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113969597
Identifier: 113969597
GI number: 113969597
Start: 1462194
End: 1462643
Strand: Direct
Name: 113969597
Synonym: Shewmr4_1253
Alternate gene names: NA
Gene position: 1462194-1462643 (Clockwise)
Preceding gene: 113969596
Following gene: 113969601
Centisome position: 31.07
GC content: 48.22
Gene sequence:
>450_bases ATGAAACGCTACCTATTCATTGTTGCGGCGCTCCTACTGACAGGGTGTGCTGCCAAAGATAAATATGTTCAGTGGGAAGA TGTGCCGCCAAGCAGTTTTCCTAAGCTGACGGCCATAGGTTATGCCCCGCTAGAGACTCAACCGGCTAAAGAGCAGTCCC AACGAGTATTGATGGCGATGCAGGCCTCAAAAATCGTGGCTTATCGTGAGCTGGCTGAACAAGTGTATGGACAGAAGATC ACTGCCAATAGCAGTGTCAGTGATTGGATGCTGACAGATGACAATGTTAAAGCTTCTGTGACTGGGGTGATCCGCGGCGC GAGAGTGGTAAAAAGTTATCCGGCAGGGGATCACTATGTGACCGAGTTGGAACTTGATTTTGCCAAGGTATGGCAAATTT ACCAACAGCAGAGCCGCCCACAAAGAATTAAAGACGTTACCTATTTTTAG
Upstream 100 bases:
>100_bases ATTACATGCAGCCTTCAGAGCAAGTTATCTCTCAGGATGGGATTTTATATCGCCAGTCGAGCCCTGGTATGAATGAAGTG CGAGTGCTAGGAGATGGAAA
Downstream 100 bases:
>100_bases CACTAGGTAGGTTTTAGCGCTAGTGCAGGTGCTGCTAGTCCTTGCTGTACCGATAAACAAAAGCCGCACTCAGTTTTAGC GCGGCTTTTGTTTATATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MKRYLFIVAALLLTGCAAKDKYVQWEDVPPSSFPKLTAIGYAPLETQPAKEQSQRVLMAMQASKIVAYRELAEQVYGQKI TANSSVSDWMLTDDNVKASVTGVIRGARVVKSYPAGDHYVTELELDFAKVWQIYQQQSRPQRIKDVTYF
Sequences:
>Translated_149_residues MKRYLFIVAALLLTGCAAKDKYVQWEDVPPSSFPKLTAIGYAPLETQPAKEQSQRVLMAMQASKIVAYRELAEQVYGQKI TANSSVSDWMLTDDNVKASVTGVIRGARVVKSYPAGDHYVTELELDFAKVWQIYQQQSRPQRIKDVTYF >Mature_149_residues MKRYLFIVAALLLTGCAAKDKYVQWEDVPPSSFPKLTAIGYAPLETQPAKEQSQRVLMAMQASKIVAYRELAEQVYGQKI TANSSVSDWMLTDDNVKASVTGVIRGARVVKSYPAGDHYVTELELDFAKVWQIYQQQSRPQRIKDVTYF
Specific function: Unknown
COG id: COG3018
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16856; Mature: 16856
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYLFIVAALLLTGCAAKDKYVQWEDVPPSSFPKLTAIGYAPLETQPAKEQSQRVLMAM CCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH QASKIVAYRELAEQVYGQKITANSSVSDWMLTDDNVKASVTGVIRGARVVKSYPAGDHYV HHHHHHHHHHHHHHHHCCEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCEE TELELDFAKVWQIYQQQSRPQRIKDVTYF EEEEHHHHHHHHHHHHHCCCCHHHCCCCC >Mature Secondary Structure MKRYLFIVAALLLTGCAAKDKYVQWEDVPPSSFPKLTAIGYAPLETQPAKEQSQRVLMAM CCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH QASKIVAYRELAEQVYGQKITANSSVSDWMLTDDNVKASVTGVIRGARVVKSYPAGDHYV HHHHHHHHHHHHHHHHCCEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCEE TELELDFAKVWQIYQQQSRPQRIKDVTYF EEEEHHHHHHHHHHHHHCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA