| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is yafP [C]
Identifier: 113969562
GI number: 113969562
Start: 1417849
End: 1418370
Strand: Direct
Name: yafP [C]
Synonym: Shewmr4_1218
Alternate gene names: 113969562
Gene position: 1417849-1418370 (Clockwise)
Preceding gene: 113969561
Following gene: 113969563
Centisome position: 30.13
GC content: 48.85
Gene sequence:
>522_bases GTGTCCGCCGCCAATTCAATCGAAAAGCCAGTCGAAGTCGTCCCCTATCAGCGCCGTTATGCCCGTGCGGTGAGTGAACT CTTTCATCAGTGCGTGCATCAAATACAACATGAGCGTTATAACGCCGCGCAGCTTAAGGCTTGGTCGCAGGCACCCCGTT CGAGTCAACATTGGCATTTACGCTTAAGTCGTTCCCAAGCATGGATTATTTTGGTGACAGATGCCGCGGGCTTATCTAAG ATTTGTGCAGGTTTTATCAATGTCGAAACGGATTTTCACCATAGAGGATATATAGATAGCCTCTATATTGATCCCGATTG GCAACGGCAGGGGCTGGGGGAGCGAGCTTATCGACAGCTAGAACTGTGGGCGAGGGAGCAGGGGTATAGTCAATTGAGTG CCGATGCGTCTTATCTTTCCCGCGGGCTGTTTATTAAACTCGGATTTGTCCAACAGCAGCGCAGCTATCAACAAAAACTG GGCCAGGTATTGCCGAGTTTTTATATGACTAAAAAACTGTAA
Upstream 100 bases:
>100_bases TGTTTACAGCGACAAACCTTTTCTTATCGCGTTGATGCTATCGCTCGAATCTAAATCGCGGCAGAATATAGCGATTATTT ACACTCTTGGTTGATTACTC
Downstream 100 bases:
>100_bases CTGAATGGGAATACACTGCTTATGTGCCCATTGGTCATGATTAACCCATAGGAGTGGACTCCAATGCAGATACGCTTATT TTCACCTCCGGACGTGGCAC
Product: acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; Acetyltransferase YafP; Acetyltransferase Gnat Family; Acetyltransferase Protein
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MSAANSIEKPVEVVPYQRRYARAVSELFHQCVHQIQHERYNAAQLKAWSQAPRSSQHWHLRLSRSQAWIILVTDAAGLSK ICAGFINVETDFHHRGYIDSLYIDPDWQRQGLGERAYRQLELWAREQGYSQLSADASYLSRGLFIKLGFVQQQRSYQQKL GQVLPSFYMTKKL
Sequences:
>Translated_173_residues MSAANSIEKPVEVVPYQRRYARAVSELFHQCVHQIQHERYNAAQLKAWSQAPRSSQHWHLRLSRSQAWIILVTDAAGLSK ICAGFINVETDFHHRGYIDSLYIDPDWQRQGLGERAYRQLELWAREQGYSQLSADASYLSRGLFIKLGFVQQQRSYQQKL GQVLPSFYMTKKL >Mature_172_residues SAANSIEKPVEVVPYQRRYARAVSELFHQCVHQIQHERYNAAQLKAWSQAPRSSQHWHLRLSRSQAWIILVTDAAGLSKI CAGFINVETDFHHRGYIDSLYIDPDWQRQGLGERAYRQLELWAREQGYSQLSADASYLSRGLFIKLGFVQQQRSYQQKLG QVLPSFYMTKKL
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 20144; Mature: 20013
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAANSIEKPVEVVPYQRRYARAVSELFHQCVHQIQHERYNAAQLKAWSQAPRSSQHWHL CCCCCHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEE RLSRSQAWIILVTDAAGLSKICAGFINVETDFHHRGYIDSLYIDPDWQRQGLGERAYRQL EEECCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHCCCHHHHHHH ELWAREQGYSQLSADASYLSRGLFIKLGFVQQQRSYQQKLGQVLPSFYMTKKL HHHHHHCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SAANSIEKPVEVVPYQRRYARAVSELFHQCVHQIQHERYNAAQLKAWSQAPRSSQHWHL CCCCHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEE RLSRSQAWIILVTDAAGLSKICAGFINVETDFHHRGYIDSLYIDPDWQRQGLGERAYRQL EEECCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHCCCHHHHHHH ELWAREQGYSQLSADASYLSRGLFIKLGFVQQQRSYQQKLGQVLPSFYMTKKL HHHHHHCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA