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The map label for this gene is yceI [C]

Identifier: 113969522

GI number: 113969522

Start: 1382389

End: 1382964

Strand: Direct

Name: yceI [C]

Synonym: Shewmr4_1178

Alternate gene names: 113969522

Gene position: 1382389-1382964 (Clockwise)

Preceding gene: 113969521

Following gene: 113969525

Centisome position: 29.37

GC content: 45.14

Gene sequence:

>576_bases
ATGAAAAAACAACTATTAGCTGCTTTGATTGGTGGGTCTTTACTGGCTCCAATGGCTGCATCTGCCGCCGATTATGTAAT
TGACCGCGAAGGTGCTCATGCATCTATTACCTTTAAAGTAAGTCACTTAGGTTATAGCTATGTCGTAGGTCGTTTTAACG
ATTTCAGCGGTGATTTCAGCTACGACGCTAAAAATCCAACGGCAGCTAAAGTGAATGTTAAAGTGAACACCTTAAGCGTT
GACTCTAACCATGCCGAGCGTGATAAGCACATTCGTAGTGGCGACTTTTTAAATACGGCTAAATTTGCTGAAGCGACTTT
CGTTTCGACCTCGGTTGAAGACAAAGGCAATGGCGATATGGTTATCACAGGTAACTTCACGCTAAATGGTGTGACTAAAC
CGTTGGCAATCCAAGCGCATGCCGTGGGTGAGGGTCAAGATCCTTGGGGCGGATACCGTGCAGGTTTTATCGGTACTACC
ACGTTTGCGATGAAAGATTACGGTATCAAGATGGACTTAGGCCCAGCGTCTGCCAATGTTGAGTTAGATTTAGTGGTAGA
AGGCGTGCGTAAGTAA

Upstream 100 bases:

>100_bases
GCTCTGGTTTTACTGCATGCGTTAGGCGCGTTAAAGCACCATTTTATCGATAAAGATTCAACACTACTCAAGATGATTAA
ATTTAACCGAGGATAATATA

Downstream 100 bases:

>100_bases
GCTTAACGTTACTGAGCTGCATTTATCAACGAATAAAAAAGCGCCCTTGGGCGCTTTTTGCTTTTATGGATAGGCGCTTA
GGCTTATTCCTGACCCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKKQLLAALIGGSLLAPMAASAADYVIDREGAHASITFKVSHLGYSYVVGRFNDFSGDFSYDAKNPTAAKVNVKVNTLSV
DSNHAERDKHIRSGDFLNTAKFAEATFVSTSVEDKGNGDMVITGNFTLNGVTKPLAIQAHAVGEGQDPWGGYRAGFIGTT
TFAMKDYGIKMDLGPASANVELDLVVEGVRK

Sequences:

>Translated_191_residues
MKKQLLAALIGGSLLAPMAASAADYVIDREGAHASITFKVSHLGYSYVVGRFNDFSGDFSYDAKNPTAAKVNVKVNTLSV
DSNHAERDKHIRSGDFLNTAKFAEATFVSTSVEDKGNGDMVITGNFTLNGVTKPLAIQAHAVGEGQDPWGGYRAGFIGTT
TFAMKDYGIKMDLGPASANVELDLVVEGVRK
>Mature_191_residues
MKKQLLAALIGGSLLAPMAASAADYVIDREGAHASITFKVSHLGYSYVVGRFNDFSGDFSYDAKNPTAAKVNVKVNTLSV
DSNHAERDKHIRSGDFLNTAKFAEATFVSTSVEDKGNGDMVITGNFTLNGVTKPLAIQAHAVGEGQDPWGGYRAGFIGTT
TFAMKDYGIKMDLGPASANVELDLVVEGVRK

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0312 family. Type 1 subfamily

Homologues:

Organism=Escherichia coli, GI1787295, Length=191, Percent_Identity=55.4973821989529, Blast_Score=225, Evalue=2e-60,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): Y1178_SHESM (Q0HL09)

Other databases:

- EMBL:   CP000446
- RefSeq:   YP_733315.1
- ProteinModelPortal:   Q0HL09
- SMR:   Q0HL09
- STRING:   Q0HL09
- GeneID:   4251462
- GenomeReviews:   CP000446_GR
- KEGG:   she:Shewmr4_1178
- eggNOG:   COG2353
- HOGENOM:   HBG700502
- OMA:   SINFKIQ
- ProtClustDB:   PRK03757
- HAMAP:   MF_00780
- InterPro:   IPR007372
- Gene3D:   G3DSA:2.40.128.110
- SMART:   SM00867

Pfam domain/function: PF04264 YceI; SSF101874 Lipid/polyisoprenoid-bd_YceI

EC number: NA

Molecular weight: Translated: 20309; Mature: 20309

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQLLAALIGGSLLAPMAASAADYVIDREGAHASITFKVSHLGYSYVVGRFNDFSGDFS
CCHHHHHHHHCCHHHHHHHCCCCCEEEECCCCEEEEEEEEECCCEEEEEECCCCCCCCEE
YDAKNPTAAKVNVKVNTLSVDSNHAERDKHIRSGDFLNTAKFAEATFVSTSVEDKGNGDM
ECCCCCCEEEEEEEEEEEEECCCCCHHHHCCCCCCCCCCHHHCEEEEEEECCCCCCCCCE
VITGNFTLNGVTKPLAIQAHAVGEGQDPWGGYRAGFIGTTTFAMKDYGIKMDLGPASANV
EEECCEEECCCCCCEEEEEEECCCCCCCCCCEECCEEEEEEEEEECCCEEEEECCCCCCE
ELDLVVEGVRK
EEEEEEEECCC
>Mature Secondary Structure
MKKQLLAALIGGSLLAPMAASAADYVIDREGAHASITFKVSHLGYSYVVGRFNDFSGDFS
CCHHHHHHHHCCHHHHHHHCCCCCEEEECCCCEEEEEEEEECCCEEEEEECCCCCCCCEE
YDAKNPTAAKVNVKVNTLSVDSNHAERDKHIRSGDFLNTAKFAEATFVSTSVEDKGNGDM
ECCCCCCEEEEEEEEEEEEECCCCCHHHHCCCCCCCCCCHHHCEEEEEEECCCCCCCCCE
VITGNFTLNGVTKPLAIQAHAVGEGQDPWGGYRAGFIGTTTFAMKDYGIKMDLGPASANV
EEECCEEECCCCCCEEEEEEECCCCCCCCCCEECCEEEEEEEEEECCCEEEEECCCCCCE
ELDLVVEGVRK
EEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA