Click here to switch to the map view.

The map label for this gene is 113969436

Identifier: 113969436

GI number: 113969436

Start: 1282734

End: 1283741

Strand: Direct

Name: 113969436

Synonym: Shewmr4_1092

Alternate gene names: NA

Gene position: 1282734-1283741 (Clockwise)

Preceding gene: 113969435

Following gene: 113969438

Centisome position: 27.26

GC content: 49.7

Gene sequence:

>1008_bases
ATGAGCGAAGATATTAAAGATCACAAAGAAATTACCCGCGCGAATATTCGCGTCAATGCCCAGCTCGATGTGCCCTTTTT
GGCGATGAACACCCTAGCGGCCATCATCGCCAGCTACGGACTCTTGGCCAACAGCGCCGCGGTGGTCATTGGCGCCATGA
TTGTCGCTATGCTGTTTTCCCCCATTTTAGGCTTGGCATTAGGGCTGGTCGAAGGGGAAAAACTCTTAGTCCGCCATGCC
ATTAAAAGTTTGATTGTGGGGAGTATTCTGGTTTATTTCACCGCCTTTTTAATTGGCTTTCTGCATTCCGATATTCCTAT
CACGCCGGAGATCATGGCAAGAACGGCGCCTAACTTTCTCGATTTGATGGTCGCGTTTGCGGGTGGTGCGGCTGGCGCCT
ATGCGACCATTTCGCCGCGGTTAAGTACTTCCTTTGTGGGGGTGGCGATTGCTACCGCATTAGTGCCGCCCCTGTGTGCC
TCGGCGATATTGCTCGGCCATGGCAATTTTGAACTCGCCCGAGGCGCCTTCTTACTGACGTTTACCAACATAGTCGCCAT
CCAATTTGTGTCCTCCGTGGTGCTGTGGTTGAACGGTTTCCACGGATTTTATTTTTGGCAAAAAAGCTCACTGTGGGAGT
TGTTGAAACGTAACTTTATTACATTGATCTTGTTGGTTATTTTAGTTATTGCCCTCAGTGTGAATCTGCATAATGTGGTT
GCAAGACAGTTGTATGAGAGCAAAGTGACTCGGATTGTGAGTGAGCAGCTACTCAAGTTCCCCAATATGCGGTTGATTAA
AGTGGGGATTGAAGAACAAGCCAGTCAATGGATAGTGCGGGTCACCGTTGGCGGCATTAAAAAACCAGATGCCAGCTTTG
TACGGCTACTGGAGAGTGAGTTGACACAGACGGGGCAAGTAAAACCGGCGACCGTGCGCGTACGTTACTTTCCGGTCGAT
GTGATTGACCGCGATGGTGATGTGAAAGCGATTCAGGAGCAGGATTAG

Upstream 100 bases:

>100_bases
AAACCCCATTGCGGCTATTTTCTGTTCAGCTATATTGGTTGGGATATTTTTGTTTTAAATGTGCAACTTAGGTCCCATCC
TCCCTTGCTGAGCAGACGAT

Downstream 100 bases:

>100_bases
TCGGCATAACCTTTTGTGCATAAAAGAAAAGCCCCGCAATTGCGGGGCTTTTTATGTACCTATAAACGCATGGCGCTTAC
TTGGTCATACGCTTGTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSEDIKDHKEITRANIRVNAQLDVPFLAMNTLAAIIASYGLLANSAAVVIGAMIVAMLFSPILGLALGLVEGEKLLVRHA
IKSLIVGSILVYFTAFLIGFLHSDIPITPEIMARTAPNFLDLMVAFAGGAAGAYATISPRLSTSFVGVAIATALVPPLCA
SAILLGHGNFELARGAFLLTFTNIVAIQFVSSVVLWLNGFHGFYFWQKSSLWELLKRNFITLILLVILVIALSVNLHNVV
ARQLYESKVTRIVSEQLLKFPNMRLIKVGIEEQASQWIVRVTVGGIKKPDASFVRLLESELTQTGQVKPATVRVRYFPVD
VIDRDGDVKAIQEQD

Sequences:

>Translated_335_residues
MSEDIKDHKEITRANIRVNAQLDVPFLAMNTLAAIIASYGLLANSAAVVIGAMIVAMLFSPILGLALGLVEGEKLLVRHA
IKSLIVGSILVYFTAFLIGFLHSDIPITPEIMARTAPNFLDLMVAFAGGAAGAYATISPRLSTSFVGVAIATALVPPLCA
SAILLGHGNFELARGAFLLTFTNIVAIQFVSSVVLWLNGFHGFYFWQKSSLWELLKRNFITLILLVILVIALSVNLHNVV
ARQLYESKVTRIVSEQLLKFPNMRLIKVGIEEQASQWIVRVTVGGIKKPDASFVRLLESELTQTGQVKPATVRVRYFPVD
VIDRDGDVKAIQEQD
>Mature_334_residues
SEDIKDHKEITRANIRVNAQLDVPFLAMNTLAAIIASYGLLANSAAVVIGAMIVAMLFSPILGLALGLVEGEKLLVRHAI
KSLIVGSILVYFTAFLIGFLHSDIPITPEIMARTAPNFLDLMVAFAGGAAGAYATISPRLSTSFVGVAIATALVPPLCAS
AILLGHGNFELARGAFLLTFTNIVAIQFVSSVVLWLNGFHGFYFWQKSSLWELLKRNFITLILLVILVIALSVNLHNVVA
RQLYESKVTRIVSEQLLKFPNMRLIKVGIEEQASQWIVRVTVGGIKKPDASFVRLLESELTQTGQVKPATVRVRYFPVDV
IDRDGDVKAIQEQD

Specific function: Unknown

COG id: COG1808

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005233
- InterPro:   IPR013031
- InterPro:   IPR005240 [H]

Pfam domain/function: PF04087 DUF389 [H]

EC number: NA

Molecular weight: Translated: 36570; Mature: 36439

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDIKDHKEITRANIRVNAQLDVPFLAMNTLAAIIASYGLLANSAAVVIGAMIVAMLFS
CCCCHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PILGLALGLVEGEKLLVRHAIKSLIVGSILVYFTAFLIGFLHSDIPITPEIMARTAPNFL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHH
DLMVAFAGGAAGAYATISPRLSTSFVGVAIATALVPPLCASAILLGHGNFELARGAFLLT
HHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHH
FTNIVAIQFVSSVVLWLNGFHGFYFWQKSSLWELLKRNFITLILLVILVIALSVNLHNVV
HHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ARQLYESKVTRIVSEQLLKFPNMRLIKVGIEEQASQWIVRVTVGGIKKPDASFVRLLESE
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCEEEEEEECCCCCCCHHHHHHHHHH
LTQTGQVKPATVRVRYFPVDVIDRDGDVKAIQEQD
HHHCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
SEDIKDHKEITRANIRVNAQLDVPFLAMNTLAAIIASYGLLANSAAVVIGAMIVAMLFS
CCCHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PILGLALGLVEGEKLLVRHAIKSLIVGSILVYFTAFLIGFLHSDIPITPEIMARTAPNFL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHH
DLMVAFAGGAAGAYATISPRLSTSFVGVAIATALVPPLCASAILLGHGNFELARGAFLLT
HHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHH
FTNIVAIQFVSSVVLWLNGFHGFYFWQKSSLWELLKRNFITLILLVILVIALSVNLHNVV
HHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ARQLYESKVTRIVSEQLLKFPNMRLIKVGIEEQASQWIVRVTVGGIKKPDASFVRLLESE
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCEEEEEEECCCCCCCHHHHHHHHHH
LTQTGQVKPATVRVRYFPVDVIDRDGDVKAIQEQD
HHHCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]