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The map label for this gene is glbN [H]

Identifier: 113969423

GI number: 113969423

Start: 1264990

End: 1265481

Strand: Direct

Name: glbN [H]

Synonym: Shewmr4_1079

Alternate gene names: 113969423

Gene position: 1264990-1265481 (Clockwise)

Preceding gene: 113969422

Following gene: 113969426

Centisome position: 26.88

GC content: 50.2

Gene sequence:

>492_bases
ATGAGTCATTTTCGCAAGTTTCTCGCACACTTAACCACGGCACTTTTAATCACAGCACTTCCAATCTCGACAGTTTTACT
TGCTGGCTGCGCCCAATCTGATCCTAACACCCCATCACCTAGTGCGAACGCCAGTCCTACAACCTTGTATCAGGCCCTCG
GTGATGATTCGGGCGTTTCGGCTATCGTTGATGGCTTGCTTGCGCGTATCGCGCGGGATCCCCGCATTGTGCACCACTTC
GATGAAACGGATATTGCCATCTTTCGCGAGCGTCTTATCGAACATTTGTGCGCTGTCACGGATGGTGGCTGCGTCTATCA
AGGCGAAAACATGGCAGACAGCCATAAAGGTTTGAATATCACTCAGGCCGATTTTGATGCTTTAGTCGGGCATTTGATTG
AATCGATGAAGGAACAGCATATTTCAACATCGACCCGCAATGCGCTGCTGAAGCGCCTTGCGCCCATGTATTCCGAGGTG
ACGTATCAGTAA

Upstream 100 bases:

>100_bases
TCAATAAGCATCTGTCAGTGGTCACGGCCTATGCCGATTTAGGCTGCATTGCGGGTTTTGAGCATCAGCAGGGCTGGTAT
CTGTCGTTGGAGGGCGCGCT

Downstream 100 bases:

>100_bases
CGGCTCGCTAACTCGTTCGTGTGGGTGATGCAGTTAAGGCTGGGGATAAATTGGCATTAACGTAACAATGACTCTTCTAT
CGGATGAAAGCAGCTAGCCG

Product: globin

Products: NA

Alternate protein names: Truncated Hb; Cyanoglobin [H]

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MSHFRKFLAHLTTALLITALPISTVLLAGCAQSDPNTPSPSANASPTTLYQALGDDSGVSAIVDGLLARIARDPRIVHHF
DETDIAIFRERLIEHLCAVTDGGCVYQGENMADSHKGLNITQADFDALVGHLIESMKEQHISTSTRNALLKRLAPMYSEV
TYQ

Sequences:

>Translated_163_residues
MSHFRKFLAHLTTALLITALPISTVLLAGCAQSDPNTPSPSANASPTTLYQALGDDSGVSAIVDGLLARIARDPRIVHHF
DETDIAIFRERLIEHLCAVTDGGCVYQGENMADSHKGLNITQADFDALVGHLIESMKEQHISTSTRNALLKRLAPMYSEV
TYQ
>Mature_162_residues
SHFRKFLAHLTTALLITALPISTVLLAGCAQSDPNTPSPSANASPTTLYQALGDDSGVSAIVDGLLARIARDPRIVHHFD
ETDIAIFRERLIEHLCAVTDGGCVYQGENMADSHKGLNITQADFDALVGHLIESMKEQHISTSTRNALLKRLAPMYSEVT
YQ

Specific function: Unknown

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group I subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR019795
- InterPro:   IPR001486
- InterPro:   IPR016339 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 17716; Mature: 17585

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHFRKFLAHLTTALLITALPISTVLLAGCAQSDPNTPSPSANASPTTLYQALGDDSGVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCHH
AIVDGLLARIARDPRIVHHFDETDIAIFRERLIEHLCAVTDGGCVYQGENMADSHKGLNI
HHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHCCCCCC
TQADFDALVGHLIESMKEQHISTSTRNALLKRLAPMYSEVTYQ
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SHFRKFLAHLTTALLITALPISTVLLAGCAQSDPNTPSPSANASPTTLYQALGDDSGVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCHH
AIVDGLLARIARDPRIVHHFDETDIAIFRERLIEHLCAVTDGGCVYQGENMADSHKGLNI
HHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHCCCCCC
TQADFDALVGHLIESMKEQHISTSTRNALLKRLAPMYSEVTYQ
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1609281; 8063099 [H]