| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is rhlE [H]
Identifier: 113969304
GI number: 113969304
Start: 1123923
End: 1125278
Strand: Direct
Name: rhlE [H]
Synonym: Shewmr4_0960
Alternate gene names: 113969304
Gene position: 1123923-1125278 (Clockwise)
Preceding gene: 113969303
Following gene: 113969305
Centisome position: 23.88
GC content: 52.43
Gene sequence:
>1356_bases ATGACCATTCCTAAGCCTTTTTCTTCCACAGAGTCTTCCCCTGAGTCGTTAACCTTTGCCGAGCTTGGCGTTAATGCGGC GTTATGTTCGGTATTGCCTGCCGCGCTCAAGCATCCGACACGGGTACAGCAATTAGCGATTCCGGCTATTCTTGCGGGAC GAGATGTGTTAGCACTGTCGCAAACCGGTAGCGGTAAAACCTTGGCTTTTGGATTGCCCTTGCTACAAGCCATCCATCAA CAACTTCAGCAGCAAGTGGGGTTAGCGGGGGCTGAGTCAGTGCCATCTTTGGCCAGCAATGCGCAGGCCTTGGTGCTGGT GCCGACACGGGAATTGGCGCAGCAGGTAACGACAGCGCTGCACGCGCTGGCGAGTAAGTTATCGTCTTCTTTGAAGATAC AGCTCCTCTGTGGCGGCATCGCGCAGGAAGAACAATTAGCCGAACTTGCCGCTAAACCGCAGCTTGTCGTGGCAACCCCT GGGCGCTTATTGGATTTATGCACTCAGTCCCATATCAGTCTCGACTCGATAAAATATCTAGTGCTAGACGAAGCAGACCG CTTACTGGAAATGGGATTTTGGCCCGATGTGCAAAAGCTGATGGCAATGATGCTTAAGCGTAAGCAAACCTTACTGTTTT CTGCCACCTTGCCAGAGGCGTTAGATGCCTTGGCGGGTAAATTGCTGACCAACAATCCCCTACGGGTTGAGGCCAGTACA CGCAATGCTATCGCCGCCGAAATCGAAGAGCGACTGTATTTCGTCAATAAGGGCAGTAAGGCGCAGGCATTGATTGCGTT ACTCAAACAATATCAATGGCCGCAAGTGCTAGTGTTTATCAGTGCCCGCGATGATGCGGATGCGATAGCGAAACGACTCG TTAAGGCGGGGATAAATGCTGCTGCGCTGCACGGCGAAAAGGATCAAACCGTGCGCAGTCAAACCTTGGCCGACTTTAAA GCCAATCGCATTCAAGTGGTGGTGGCGACGGATTTAATGGCCCGAGGTATTCATGTTGATGCCTTGCCTGTGGTGATCAA TTTAGATTTACCCACCAGTGCGCCTGTATATGTGCACCGTATTGGCCGCACCGCAAGGGCGGGCGCCAAAGGGCTCGCCA TCTCTTTGGTGTGCCATGGTGAAATGCCAAGCTTAAGCGCGATCCGCAACTTGACGGCGCGTGAGTTACCGTTAGCATCA TTGGCAGACTTTCCTGTGACCGATAAGCCGAGTGAAAGAGCTAGAGAGGATGGTGCTGAGCATAACGTTGCGCCTAAGCG TCCACCTCGGGATAAACAGGCGAATCGTCGCAGTCTTAATAAGCACAGCGTCAAGGCATTTAAAGGTAAGCGTTGA
Upstream 100 bases:
>100_bases AAAACAACTATCCCAAGGCTTTAGTCAAAGCCGAAACAATATTGGTATTAGCAGCCAACTCTGCGTAAACTTTCGCTCCC ATGTTTTTATTGGTGTTGCG
Downstream 100 bases:
>100_bases GTGTAAGCCTGCGCTGCTATCCATACTTATTGGTTGCGGCTTACCTGTTTCCAATGGGCGAACTATATAGCTAGTTTAAG GGCTTACTCACATTAGCGGT
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MTIPKPFSSTESSPESLTFAELGVNAALCSVLPAALKHPTRVQQLAIPAILAGRDVLALSQTGSGKTLAFGLPLLQAIHQ QLQQQVGLAGAESVPSLASNAQALVLVPTRELAQQVTTALHALASKLSSSLKIQLLCGGIAQEEQLAELAAKPQLVVATP GRLLDLCTQSHISLDSIKYLVLDEADRLLEMGFWPDVQKLMAMMLKRKQTLLFSATLPEALDALAGKLLTNNPLRVEAST RNAIAAEIEERLYFVNKGSKAQALIALLKQYQWPQVLVFISARDDADAIAKRLVKAGINAAALHGEKDQTVRSQTLADFK ANRIQVVVATDLMARGIHVDALPVVINLDLPTSAPVYVHRIGRTARAGAKGLAISLVCHGEMPSLSAIRNLTARELPLAS LADFPVTDKPSERAREDGAEHNVAPKRPPRDKQANRRSLNKHSVKAFKGKR
Sequences:
>Translated_451_residues MTIPKPFSSTESSPESLTFAELGVNAALCSVLPAALKHPTRVQQLAIPAILAGRDVLALSQTGSGKTLAFGLPLLQAIHQ QLQQQVGLAGAESVPSLASNAQALVLVPTRELAQQVTTALHALASKLSSSLKIQLLCGGIAQEEQLAELAAKPQLVVATP GRLLDLCTQSHISLDSIKYLVLDEADRLLEMGFWPDVQKLMAMMLKRKQTLLFSATLPEALDALAGKLLTNNPLRVEAST RNAIAAEIEERLYFVNKGSKAQALIALLKQYQWPQVLVFISARDDADAIAKRLVKAGINAAALHGEKDQTVRSQTLADFK ANRIQVVVATDLMARGIHVDALPVVINLDLPTSAPVYVHRIGRTARAGAKGLAISLVCHGEMPSLSAIRNLTARELPLAS LADFPVTDKPSERAREDGAEHNVAPKRPPRDKQANRRSLNKHSVKAFKGKR >Mature_450_residues TIPKPFSSTESSPESLTFAELGVNAALCSVLPAALKHPTRVQQLAIPAILAGRDVLALSQTGSGKTLAFGLPLLQAIHQQ LQQQVGLAGAESVPSLASNAQALVLVPTRELAQQVTTALHALASKLSSSLKIQLLCGGIAQEEQLAELAAKPQLVVATPG RLLDLCTQSHISLDSIKYLVLDEADRLLEMGFWPDVQKLMAMMLKRKQTLLFSATLPEALDALAGKLLTNNPLRVEASTR NAIAAEIEERLYFVNKGSKAQALIALLKQYQWPQVLVFISARDDADAIAKRLVKAGINAAALHGEKDQTVRSQTLADFKA NRIQVVVATDLMARGIHVDALPVVINLDLPTSAPVYVHRIGRTARAGAKGLAISLVCHGEMPSLSAIRNLTARELPLASL ADFPVTDKPSERAREDGAEHNVAPKRPPRDKQANRRSLNKHSVKAFKGKR
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI20149629, Length=434, Percent_Identity=34.5622119815668, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI216548263, Length=386, Percent_Identity=36.2694300518135, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI13518015, Length=386, Percent_Identity=36.2694300518135, Blast_Score=235, Evalue=6e-62, Organism=Homo sapiens, GI262118318, Length=386, Percent_Identity=36.2694300518135, Blast_Score=235, Evalue=6e-62, Organism=Homo sapiens, GI262231852, Length=386, Percent_Identity=36.2694300518135, Blast_Score=235, Evalue=8e-62, Organism=Homo sapiens, GI41327773, Length=383, Percent_Identity=34.4647519582245, Blast_Score=229, Evalue=5e-60, Organism=Homo sapiens, GI21071032, Length=365, Percent_Identity=35.0684931506849, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI41327771, Length=371, Percent_Identity=34.2318059299191, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI31542656, Length=397, Percent_Identity=37.27959697733, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI51094101, Length=388, Percent_Identity=34.2783505154639, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI164419743, Length=388, Percent_Identity=34.2783505154639, Blast_Score=215, Evalue=6e-56, Organism=Homo sapiens, GI222352149, Length=367, Percent_Identity=34.0599455040872, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI224593278, Length=391, Percent_Identity=34.5268542199489, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI45446747, Length=380, Percent_Identity=33.4210526315789, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI45446743, Length=380, Percent_Identity=33.4210526315789, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI148613856, Length=354, Percent_Identity=33.8983050847458, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI38201710, Length=354, Percent_Identity=33.8983050847458, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI188035877, Length=362, Percent_Identity=35.6353591160221, Blast_Score=202, Evalue=8e-52, Organism=Homo sapiens, GI87196351, Length=383, Percent_Identity=34.7258485639687, Blast_Score=201, Evalue=9e-52, Organism=Homo sapiens, GI301171475, Length=383, Percent_Identity=34.2036553524804, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI301171467, Length=383, Percent_Identity=34.7258485639687, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI41327776, Length=434, Percent_Identity=33.4101382488479, Blast_Score=199, Evalue=3e-51, Organism=Homo sapiens, GI169881239, Length=401, Percent_Identity=33.1670822942643, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI13514809, Length=401, Percent_Identity=33.1670822942643, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI38569505, Length=382, Percent_Identity=33.7696335078534, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI38569503, Length=382, Percent_Identity=34.0314136125654, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI4758138, Length=379, Percent_Identity=32.7176781002639, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI7661920, Length=410, Percent_Identity=29.7560975609756, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI55749865, Length=355, Percent_Identity=32.9577464788732, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI164664518, Length=377, Percent_Identity=29.973474801061, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI4503529, Length=394, Percent_Identity=31.2182741116751, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI83700235, Length=394, Percent_Identity=30.2030456852792, Blast_Score=176, Evalue=5e-44, Organism=Homo sapiens, GI21040371, Length=355, Percent_Identity=30.9859154929577, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI4758112, Length=352, Percent_Identity=30.3977272727273, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI18375623, Length=352, Percent_Identity=30.3977272727273, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI50659095, Length=351, Percent_Identity=29.6296296296296, Blast_Score=165, Evalue=7e-41, Organism=Homo sapiens, GI13514831, Length=375, Percent_Identity=31.4666666666667, Blast_Score=159, Evalue=7e-39, Organism=Homo sapiens, GI41327779, Length=356, Percent_Identity=32.5842696629214, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI38327634, Length=397, Percent_Identity=29.9748110831234, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI9506931, Length=420, Percent_Identity=29.0476190476191, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI256223453, Length=358, Percent_Identity=30.1675977653631, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI13129006, Length=345, Percent_Identity=30.1449275362319, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI6005743, Length=379, Percent_Identity=31.3984168865435, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI8922886, Length=379, Percent_Identity=31.1345646437995, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI164419732, Length=400, Percent_Identity=28.5, Blast_Score=147, Evalue=3e-35, Organism=Homo sapiens, GI62241022, Length=361, Percent_Identity=31.5789473684211, Blast_Score=145, Evalue=5e-35, Organism=Homo sapiens, GI62241024, Length=340, Percent_Identity=31.7647058823529, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI4826686, Length=353, Percent_Identity=28.0453257790368, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI256773275, Length=390, Percent_Identity=28.974358974359, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI9966805, Length=348, Percent_Identity=31.0344827586207, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI154759257, Length=405, Percent_Identity=29.6296296296296, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI17505907, Length=216, Percent_Identity=36.5740740740741, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI20336298, Length=216, Percent_Identity=36.5740740740741, Blast_Score=117, Evalue=2e-26, Organism=Escherichia coli, GI1787016, Length=389, Percent_Identity=41.1311053984576, Blast_Score=290, Evalue=2e-79, Organism=Escherichia coli, GI1787605, Length=338, Percent_Identity=43.491124260355, Blast_Score=237, Evalue=1e-63, Organism=Escherichia coli, GI87082221, Length=385, Percent_Identity=37.4025974025974, Blast_Score=236, Evalue=3e-63, Organism=Escherichia coli, GI1790214, Length=379, Percent_Identity=35.8839050131926, Blast_Score=206, Evalue=2e-54, Organism=Escherichia coli, GI1788930, Length=341, Percent_Identity=39.2961876832845, Blast_Score=201, Evalue=1e-52, Organism=Escherichia coli, GI48994977, Length=337, Percent_Identity=23.7388724035608, Blast_Score=72, Evalue=5e-14, Organism=Caenorhabditis elegans, GI86570094, Length=383, Percent_Identity=37.3368146214099, Blast_Score=241, Evalue=6e-64, Organism=Caenorhabditis elegans, GI115533224, Length=431, Percent_Identity=33.1786542923434, Blast_Score=225, Evalue=3e-59, Organism=Caenorhabditis elegans, GI17507945, Length=368, Percent_Identity=36.6847826086957, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17555296, Length=442, Percent_Identity=33.2579185520362, Blast_Score=222, Evalue=2e-58, Organism=Caenorhabditis elegans, GI71995514, Length=386, Percent_Identity=37.0466321243523, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17510309, Length=386, Percent_Identity=37.0466321243523, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17510307, Length=386, Percent_Identity=37.0466321243523, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI32565321, Length=366, Percent_Identity=34.6994535519126, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI71999646, Length=385, Percent_Identity=32.2077922077922, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI71999644, Length=385, Percent_Identity=32.2077922077922, Blast_Score=208, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17537549, Length=392, Percent_Identity=33.4183673469388, Blast_Score=202, Evalue=2e-52, Organism=Caenorhabditis elegans, GI71995724, Length=402, Percent_Identity=30.8457711442786, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17507121, Length=402, Percent_Identity=30.5970149253731, Blast_Score=201, Evalue=6e-52, Organism=Caenorhabditis elegans, GI17552642, Length=389, Percent_Identity=33.1619537275064, Blast_Score=197, Evalue=9e-51, Organism=Caenorhabditis elegans, GI17510559, Length=410, Percent_Identity=33.1707317073171, Blast_Score=194, Evalue=6e-50, Organism=Caenorhabditis elegans, GI17552114, Length=377, Percent_Identity=30.2387267904509, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI71995718, Length=382, Percent_Identity=33.5078534031414, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI71987143, Length=383, Percent_Identity=30.8093994778068, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI115532548, Length=404, Percent_Identity=30.9405940594059, Blast_Score=191, Evalue=8e-49, Organism=Caenorhabditis elegans, GI115532546, Length=404, Percent_Identity=30.9405940594059, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17507881, Length=365, Percent_Identity=30.958904109589, Blast_Score=181, Evalue=6e-46, Organism=Caenorhabditis elegans, GI193208216, Length=362, Percent_Identity=33.9779005524862, Blast_Score=181, Evalue=9e-46, Organism=Caenorhabditis elegans, GI17507877, Length=379, Percent_Identity=30.3430079155673, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI71982858, Length=373, Percent_Identity=29.7587131367292, Blast_Score=174, Evalue=7e-44, Organism=Caenorhabditis elegans, GI17507879, Length=379, Percent_Identity=30.0791556728232, Blast_Score=172, Evalue=4e-43, Organism=Caenorhabditis elegans, GI71990816, Length=386, Percent_Identity=30.5699481865285, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI193206561, Length=366, Percent_Identity=29.7814207650273, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17509811, Length=374, Percent_Identity=30.2139037433155, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17505370, Length=368, Percent_Identity=33.4239130434783, Blast_Score=158, Evalue=4e-39, Organism=Caenorhabditis elegans, GI17507641, Length=424, Percent_Identity=29.9528301886792, Blast_Score=152, Evalue=5e-37, Organism=Caenorhabditis elegans, GI17508543, Length=383, Percent_Identity=29.7650130548303, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI32564046, Length=413, Percent_Identity=30.2663438256659, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17556951, Length=384, Percent_Identity=29.4270833333333, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17553716, Length=365, Percent_Identity=27.1232876712329, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI25148203, Length=422, Percent_Identity=26.303317535545, Blast_Score=131, Evalue=9e-31, Organism=Caenorhabditis elegans, GI17536099, Length=370, Percent_Identity=27.5675675675676, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17536101, Length=370, Percent_Identity=27.5675675675676, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17536103, Length=370, Percent_Identity=27.8378378378378, Blast_Score=121, Evalue=7e-28, Organism=Caenorhabditis elegans, GI71997889, Length=407, Percent_Identity=27.2727272727273, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI25148291, Length=390, Percent_Identity=26.6666666666667, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71982862, Length=202, Percent_Identity=31.1881188118812, Blast_Score=104, Evalue=9e-23, Organism=Caenorhabditis elegans, GI25148205, Length=332, Percent_Identity=25.3012048192771, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI71987152, Length=107, Percent_Identity=38.3177570093458, Blast_Score=82, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17557982, Length=388, Percent_Identity=24.2268041237113, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI25145561, Length=361, Percent_Identity=24.3767313019391, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324217, Length=384, Percent_Identity=37.2395833333333, Blast_Score=229, Evalue=5e-61, Organism=Saccharomyces cerevisiae, GI6321360, Length=375, Percent_Identity=36.5333333333333, Blast_Score=228, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6325138, Length=375, Percent_Identity=37.0666666666667, Blast_Score=219, Evalue=8e-58, Organism=Saccharomyces cerevisiae, GI6321856, Length=406, Percent_Identity=33.4975369458128, Blast_Score=217, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6324778, Length=357, Percent_Identity=35.5742296918768, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6319714, Length=370, Percent_Identity=31.6216216216216, Blast_Score=189, Evalue=6e-49, Organism=Saccharomyces cerevisiae, GI6320041, Length=369, Percent_Identity=29.5392953929539, Blast_Score=189, Evalue=6e-49, Organism=Saccharomyces cerevisiae, GI6323021, Length=347, Percent_Identity=31.700288184438, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6320224, Length=393, Percent_Identity=29.2620865139949, Blast_Score=183, Evalue=6e-47, Organism=Saccharomyces cerevisiae, GI6321963, Length=394, Percent_Identity=31.7258883248731, Blast_Score=178, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6320449, Length=370, Percent_Identity=31.6216216216216, Blast_Score=175, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6323947, Length=372, Percent_Identity=32.258064516129, Blast_Score=172, Evalue=7e-44, Organism=Saccharomyces cerevisiae, GI6320119, Length=381, Percent_Identity=30.7086614173228, Blast_Score=169, Evalue=9e-43, Organism=Saccharomyces cerevisiae, GI6321111, Length=377, Percent_Identity=29.7082228116711, Blast_Score=168, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6322427, Length=369, Percent_Identity=31.9783197831978, Blast_Score=165, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6324620, Length=375, Percent_Identity=31.2, Blast_Score=165, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6322912, Length=376, Percent_Identity=31.3829787234043, Blast_Score=160, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6322323, Length=376, Percent_Identity=31.3829787234043, Blast_Score=160, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6321267, Length=401, Percent_Identity=30.1745635910224, Blast_Score=159, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6319618, Length=428, Percent_Identity=28.9719626168224, Blast_Score=153, Evalue=6e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=422, Percent_Identity=28.436018957346, Blast_Score=149, Evalue=8e-37, Organism=Saccharomyces cerevisiae, GI6320173, Length=256, Percent_Identity=35.15625, Blast_Score=146, Evalue=7e-36, Organism=Saccharomyces cerevisiae, GI6320400, Length=420, Percent_Identity=28.5714285714286, Blast_Score=144, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6322876, Length=438, Percent_Identity=28.0821917808219, Blast_Score=129, Evalue=9e-31, Organism=Saccharomyces cerevisiae, GI6324366, Length=369, Percent_Identity=27.6422764227642, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6321374, Length=386, Percent_Identity=24.8704663212435, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI24642151, Length=367, Percent_Identity=36.7847411444142, Blast_Score=244, Evalue=7e-65, Organism=Drosophila melanogaster, GI24585582, Length=389, Percent_Identity=35.2185089974293, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24584994, Length=402, Percent_Identity=34.0796019900498, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI24584399, Length=351, Percent_Identity=35.8974358974359, Blast_Score=224, Evalue=8e-59, Organism=Drosophila melanogaster, GI17977678, Length=370, Percent_Identity=34.0540540540541, Blast_Score=218, Evalue=5e-57, Organism=Drosophila melanogaster, GI28574962, Length=371, Percent_Identity=35.0404312668464, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI28575014, Length=364, Percent_Identity=35.4395604395604, Blast_Score=211, Evalue=7e-55, Organism=Drosophila melanogaster, GI17985987, Length=368, Percent_Identity=35.5978260869565, Blast_Score=209, Evalue=4e-54, Organism=Drosophila melanogaster, GI24662330, Length=379, Percent_Identity=33.509234828496, Blast_Score=208, Evalue=5e-54, Organism=Drosophila melanogaster, GI18857967, Length=355, Percent_Identity=33.2394366197183, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI24644479, Length=354, Percent_Identity=33.6158192090396, Blast_Score=206, Evalue=4e-53, Organism=Drosophila melanogaster, GI24644483, Length=354, Percent_Identity=33.6158192090396, Blast_Score=205, Evalue=5e-53, Organism=Drosophila melanogaster, GI281361218, Length=354, Percent_Identity=33.6158192090396, Blast_Score=205, Evalue=6e-53, Organism=Drosophila melanogaster, GI24644481, Length=354, Percent_Identity=33.6158192090396, Blast_Score=205, Evalue=6e-53, Organism=Drosophila melanogaster, GI24644487, Length=354, Percent_Identity=33.6158192090396, Blast_Score=204, Evalue=7e-53, Organism=Drosophila melanogaster, GI45551833, Length=354, Percent_Identity=33.6158192090396, Blast_Score=204, Evalue=7e-53, Organism=Drosophila melanogaster, GI24644485, Length=354, Percent_Identity=33.6158192090396, Blast_Score=204, Evalue=7e-53, Organism=Drosophila melanogaster, GI21355075, Length=379, Percent_Identity=32.7176781002639, Blast_Score=201, Evalue=9e-52, Organism=Drosophila melanogaster, GI24583279, Length=377, Percent_Identity=31.2997347480106, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24583281, Length=377, Percent_Identity=31.2997347480106, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI21356161, Length=382, Percent_Identity=32.4607329842932, Blast_Score=188, Evalue=6e-48, Organism=Drosophila melanogaster, GI24645031, Length=410, Percent_Identity=29.2682926829268, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI17136814, Length=369, Percent_Identity=32.7913279132791, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24666101, Length=367, Percent_Identity=32.425068119891, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI281365720, Length=329, Percent_Identity=33.434650455927, Blast_Score=173, Evalue=3e-43, Organism=Drosophila melanogaster, GI24581954, Length=351, Percent_Identity=29.0598290598291, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI24581952, Length=351, Percent_Identity=29.0598290598291, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI24581956, Length=351, Percent_Identity=29.0598290598291, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI17647335, Length=418, Percent_Identity=28.4688995215311, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI24582080, Length=381, Percent_Identity=30.4461942257218, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI24582078, Length=381, Percent_Identity=30.4461942257218, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI17136248, Length=381, Percent_Identity=30.4461942257218, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI24582075, Length=381, Percent_Identity=30.4461942257218, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI28571808, Length=382, Percent_Identity=29.3193717277487, Blast_Score=155, Evalue=8e-38, Organism=Drosophila melanogaster, GI28571809, Length=382, Percent_Identity=29.3193717277487, Blast_Score=155, Evalue=8e-38, Organism=Drosophila melanogaster, GI21355559, Length=397, Percent_Identity=32.7455919395466, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI20130173, Length=483, Percent_Identity=27.9503105590062, Blast_Score=148, Evalue=8e-36, Organism=Drosophila melanogaster, GI17136666, Length=418, Percent_Identity=31.1004784688995, Blast_Score=144, Evalue=8e-35, Organism=Drosophila melanogaster, GI24643725, Length=405, Percent_Identity=27.4074074074074, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI24642822, Length=355, Percent_Identity=29.2957746478873, Blast_Score=133, Evalue=3e-31, Organism=Drosophila melanogaster, GI24668515, Length=338, Percent_Identity=27.810650887574, Blast_Score=132, Evalue=6e-31, Organism=Drosophila melanogaster, GI18859659, Length=227, Percent_Identity=37.0044052863436, Blast_Score=122, Evalue=7e-28, Organism=Drosophila melanogaster, GI28571338, Length=227, Percent_Identity=37.0044052863436, Blast_Score=121, Evalue=7e-28, Organism=Drosophila melanogaster, GI19920478, Length=360, Percent_Identity=25.5555555555556, Blast_Score=116, Evalue=4e-26, Organism=Drosophila melanogaster, GI24640164, Length=359, Percent_Identity=25.9052924791086, Blast_Score=98, Evalue=9e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 48484; Mature: 48353
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIPKPFSSTESSPESLTFAELGVNAALCSVLPAALKHPTRVQQLAIPAILAGRDVLALS CCCCCCCCCCCCCCCCEEHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEE QTGSGKTLAFGLPLLQAIHQQLQQQVGLAGAESVPSLASNAQALVLVPTRELAQQVTTAL CCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEECCHHHHHHHHHHH HALASKLSSSLKIQLLCGGIAQEEQLAELAAKPQLVVATPGRLLDLCTQSHISLDSIKYL HHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCHHHHHEE VLDEADRLLEMGFWPDVQKLMAMMLKRKQTLLFSATLPEALDALAGKLLTNNPLRVEAST EEHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCEEEEECC RNAIAAEIEERLYFVNKGSKAQALIALLKQYQWPQVLVFISARDDADAIAKRLVKAGINA CHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCC AALHGEKDQTVRSQTLADFKANRIQVVVATDLMARGIHVDALPVVINLDLPTSAPVYVHR EEECCCCHHHHHHHHHHHHCCCEEEEEEEEHHHHCCCEEEEEEEEEEECCCCCCCHHHHH IGRTARAGAKGLAISLVCHGEMPSLSAIRNLTARELPLASLADFPVTDKPSERAREDGAE HCCHHHCCCCCEEEEEEECCCCCCHHHHHCCHHHCCCHHHHCCCCCCCCCHHHHHHCCCC HNVAPKRPPRDKQANRRSLNKHSVKAFKGKR CCCCCCCCCCCCHHHHHHCCHHHHHHHCCCC >Mature Secondary Structure TIPKPFSSTESSPESLTFAELGVNAALCSVLPAALKHPTRVQQLAIPAILAGRDVLALS CCCCCCCCCCCCCCCEEHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEE QTGSGKTLAFGLPLLQAIHQQLQQQVGLAGAESVPSLASNAQALVLVPTRELAQQVTTAL CCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEECCHHHHHHHHHHH HALASKLSSSLKIQLLCGGIAQEEQLAELAAKPQLVVATPGRLLDLCTQSHISLDSIKYL HHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCHHHHHEE VLDEADRLLEMGFWPDVQKLMAMMLKRKQTLLFSATLPEALDALAGKLLTNNPLRVEAST EEHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCEEEEECC RNAIAAEIEERLYFVNKGSKAQALIALLKQYQWPQVLVFISARDDADAIAKRLVKAGINA CHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCC AALHGEKDQTVRSQTLADFKANRIQVVVATDLMARGIHVDALPVVINLDLPTSAPVYVHR EEECCCCHHHHHHHHHHHHCCCEEEEEEEEHHHHCCCEEEEEEEEEEECCCCCCCHHHHH IGRTARAGAKGLAISLVCHGEMPSLSAIRNLTARELPLASLADFPVTDKPSERAREDGAE HCCHHHCCCCCEEEEEEECCCCCCHHHHHCCHHHCCCHHHHCCCCCCCCCHHHHHHCCCC HNVAPKRPPRDKQANRRSLNKHSVKAFKGKR CCCCCCCCCCCCHHHHHHCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]