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The map label for this gene is 113969266

Identifier: 113969266

GI number: 113969266

Start: 1075637

End: 1076485

Strand: Direct

Name: 113969266

Synonym: Shewmr4_0922

Alternate gene names: NA

Gene position: 1075637-1076485 (Clockwise)

Preceding gene: 113969265

Following gene: 113969267

Centisome position: 22.86

GC content: 53.0

Gene sequence:

>849_bases
GTGATACGTAGAGCCAAACCCTTACTCGGCACCTTAGTCGAAATTGCCGCTGAGTCCGTTGTCGAGCACAATGCTCATCC
TTCACTGGATGAGTCAGCCCTTCAAGCCGCTATAACAGCGGCTTTTTCGCGTGTGGCCCATATTGGTCGCTTACTCAGTT
TTCACCAGCAGGATAGTGAGCTTAATCTACTGAATCGCCAGCCGGGGCAGTGGATATCCTTAAGTTCTGATAGCCTGAGG
GTGTTGAAGCTTGCCAAGTGGTTTGGCCGGGCCAGTGACAACCTTTTCAACTGCACAGTGGGTGGCGAGATGATGTCCCG
CGGCGCCTTACCTGCTTATCTCGGGATGCCGCTGCTGTTGCAGGGAGATTGGCGAGATATTGAAATCCAAGCGGATAAAG
CCAGATTGGCTCGCCCACTGATTTTGACCTTAGATGGCATAGCTAAAGGTTATGCGGTCGATATGGCGGTCACTGAATTG
CGACGGGCTGGCGTGTGCGGTGGCTGGGTGAATGCGGGTGGCGATTTAAAAGTGTTTGGTAGCGCTTCATTAAATGTGCT
GTGCCGTGGTCCGAACGGATTGAGTCAAAAGATCAACGTCAGTAATACCGCCCTTGCCAGCTCGCGGGTTTCCCAGCATT
TAAGCCATGATTACCCCGCATTATTGTTACCAACGGGCAATTTAGACGAGCAACAGTGTGCCAGCGACCAAGAAAGGGTT
GTGAGTGTGCGCGCACCGTTTGCCTGGCGCGCCGATGCGTTAACCAAGGTAGCGGGTTACCTTGACGATGCCACTGCCGC
CGCAAAAATTCAGCAGTTGGGTGGCGATTTAGTCAACTTCGCACCCTAA

Upstream 100 bases:

>100_bases
GCAATATTAGCGGTGCCACATTAAGTTGCCGTAATTTACTCGATGGCGTAAAACGGTTACTTGTTATCCATCAACTCTTT
TTGTCGCAGTCAGTCGCATA

Downstream 100 bases:

>100_bases
GATTTGTCGATAACGCTTTCATCACTCTTGAGTATTTTTGACGATATAAATAAAAATGAAAAAATTAAGTGGTTATCCCA
ATTGGTTTTTCTGGTTGATC

Product: ApbE family protein

Products: NA

Alternate protein names: ApbE Family Protein; ApbE-Like Lipoprotein; Thiamine Biosynthesis Lipoprotein ApbE Transmembrane; Thiamine Biosynthesis Lipoprotein APBE Transmembrane; Iron-Sulfur Cluster Assembly/Repair Protein ApbE; Abpe Family Protein

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MIRRAKPLLGTLVEIAAESVVEHNAHPSLDESALQAAITAAFSRVAHIGRLLSFHQQDSELNLLNRQPGQWISLSSDSLR
VLKLAKWFGRASDNLFNCTVGGEMMSRGALPAYLGMPLLLQGDWRDIEIQADKARLARPLILTLDGIAKGYAVDMAVTEL
RRAGVCGGWVNAGGDLKVFGSASLNVLCRGPNGLSQKINVSNTALASSRVSQHLSHDYPALLLPTGNLDEQQCASDQERV
VSVRAPFAWRADALTKVAGYLDDATAAAKIQQLGGDLVNFAP

Sequences:

>Translated_282_residues
MIRRAKPLLGTLVEIAAESVVEHNAHPSLDESALQAAITAAFSRVAHIGRLLSFHQQDSELNLLNRQPGQWISLSSDSLR
VLKLAKWFGRASDNLFNCTVGGEMMSRGALPAYLGMPLLLQGDWRDIEIQADKARLARPLILTLDGIAKGYAVDMAVTEL
RRAGVCGGWVNAGGDLKVFGSASLNVLCRGPNGLSQKINVSNTALASSRVSQHLSHDYPALLLPTGNLDEQQCASDQERV
VSVRAPFAWRADALTKVAGYLDDATAAAKIQQLGGDLVNFAP
>Mature_282_residues
MIRRAKPLLGTLVEIAAESVVEHNAHPSLDESALQAAITAAFSRVAHIGRLLSFHQQDSELNLLNRQPGQWISLSSDSLR
VLKLAKWFGRASDNLFNCTVGGEMMSRGALPAYLGMPLLLQGDWRDIEIQADKARLARPLILTLDGIAKGYAVDMAVTEL
RRAGVCGGWVNAGGDLKVFGSASLNVLCRGPNGLSQKINVSNTALASSRVSQHLSHDYPALLLPTGNLDEQQCASDQERV
VSVRAPFAWRADALTKVAGYLDDATAAAKIQQLGGDLVNFAP

Specific function: Unknown

COG id: COG1477

COG function: function code H; Membrane-associated lipoprotein involved in thiamine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30277; Mature: 30277

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRAKPLLGTLVEIAAESVVEHNAHPSLDESALQAAITAAFSRVAHIGRLLSFHQQDSE
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LNLLNRQPGQWISLSSDSLRVLKLAKWFGRASDNLFNCTVGGEMMSRGALPAYLGMPLLL
HHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCCCEEEEEECHHHHHCCCCHHHHCCCEEE
QGDWRDIEIQADKARLARPLILTLDGIAKGYAVDMAVTELRRAGVCGGWVNAGGDLKVFG
ECCCCEEEEEECHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
SASLNVLCRGPNGLSQKINVSNTALASSRVSQHLSHDYPALLLPTGNLDEQQCASDQERV
CCCEEEEEECCCCCCCEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCHHHE
VSVRAPFAWRADALTKVAGYLDDATAAAKIQQLGGDLVNFAP
EEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MIRRAKPLLGTLVEIAAESVVEHNAHPSLDESALQAAITAAFSRVAHIGRLLSFHQQDSE
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LNLLNRQPGQWISLSSDSLRVLKLAKWFGRASDNLFNCTVGGEMMSRGALPAYLGMPLLL
HHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCCCEEEEEECHHHHHCCCCHHHHCCCEEE
QGDWRDIEIQADKARLARPLILTLDGIAKGYAVDMAVTELRRAGVCGGWVNAGGDLKVFG
ECCCCEEEEEECHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
SASLNVLCRGPNGLSQKINVSNTALASSRVSQHLSHDYPALLLPTGNLDEQQCASDQERV
CCCEEEEEECCCCCCCEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCHHHE
VSVRAPFAWRADALTKVAGYLDDATAAAKIQQLGGDLVNFAP
EEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA