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The map label for this gene is fecD [C]

Identifier: 113969185

GI number: 113969185

Start: 995836

End: 996984

Strand: Direct

Name: fecD [C]

Synonym: Shewmr4_0841

Alternate gene names: 113969185

Gene position: 995836-996984 (Clockwise)

Preceding gene: 113969184

Following gene: 113969186

Centisome position: 21.16

GC content: 54.05

Gene sequence:

>1149_bases
ATGATAGACACACTCAAATTGGTGACCATGAATTTTTTTAGCCACATTTTTACGCCGCTCACCCGCCAGCAATGGCTGAT
TTTAGGCTTGGCGGGCTTTGCCCTGCTCACCCCCATCGCTGCCGCGAGTTTTGGCGCGGCAAACATTAGCTTTTTAGATG
TGCTGCATGTGTTTATCAATAAACTTAGTCAGCTGTTTATGGCTGATGAGGCCGTGAGCTCCAGCAGCATGACAGAGCGG
ATTGTGATGGAGCTGCGACTGCCACGGATTTTACTCGCCTTTGTGGCGGGGGCAGGGCTGTCTTTGGCGGGGAGCGTGCT
GCAAACCGTGACCCGTAACCCCCTTGCCGATCCTTATCTGTTCGGCATTAGCTCCGGCGCCTCCTTTGGTGCCGTGGTCA
TGCTGACCCTGTTTACCAGTTCTGGCCTGTTTGGCAATGGGGGCGCCATTGCCAACTCAGGGATTTTTAGCGGTTCGGGC
AGCTTTGCGGGGCTGCTCTGGTTGAGCTTACCCTTTGGCGCCTTTATTGGTGCCAGTCTGTCGGTGCTAATCGTGCTGGC
GTTAGCAGGGTTAGGCCTTAAGAGCCAGGTAGAGCGGATGTTGCTCTCTGGCGTAGCCACCTCCTTTATGTTTGGCGCGT
TAACCAGTTTACTGCTGTACTTTGCCAGCCCGCAGGCCACCGCATCGGTATTGTTTTGGAGCCTTGGCAGTTTTGCTAAG
GCCAGTTGGTCGCTGTTGGTGCTGCCGTCCTTAGTGGTGCTGGTGAGCTTTTTGATTATTCTCGGTTGGAAGCGCCAAAT
CATGGCGTTGCAGGCGGGGGATGAAACGGCCCATACCTTAGGGGTGAATGTGCCTAAGCTGCGCCTCAATATGCTGCTGC
TCTGCTCGCTTATCACCGCCATTTTAGTGGCGACCTGTGGCGGCATTGGCTTTGTCGGCTTGATGATCCCGCACACAGTA
CGTTTGTTATTCCCCGGTCGTCAGCCCATCTTATTGACGGGGCTGGTGGGCGGCCTGTTTATGGTGTGGATAGATGTGCT
CGCCCGATGTTTGCTTGGCAATCAGGAATTACCCGTAGGGATTATTACTGCCGCGATTGGTAGCTTCTTCTTTTTGCTGA
TTTTGCGTCGGCGCAAGCTATCGAATTAG

Upstream 100 bases:

>100_bases
ACCCAGTTTCGGCTCAAGCGTTACCTCCTGTGGCCTGCGCCTGTCATAACCCCGGGGCGCCTAACGCGGCCTTGCACAAG
CATAGCGTTGAACCCACGCC

Downstream 100 bases:

>100_bases
TTGTTTGCACGCTGATGTTGATAAGCAATTGTTCGATAAGTGATTGTTGAAAGAGAAATTGCCCAACTCGAATGAGCCAA
ATTCGTACTTAGTGCGTATA

Product: transport system permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MIDTLKLVTMNFFSHIFTPLTRQQWLILGLAGFALLTPIAAASFGAANISFLDVLHVFINKLSQLFMADEAVSSSSMTER
IVMELRLPRILLAFVAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLFTSSGLFGNGGAIANSGIFSGSG
SFAGLLWLSLPFGAFIGASLSVLIVLALAGLGLKSQVERMLLSGVATSFMFGALTSLLLYFASPQATASVLFWSLGSFAK
ASWSLLVLPSLVVLVSFLIILGWKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGLMIPHTV
RLLFPGRQPILLTGLVGGLFMVWIDVLARCLLGNQELPVGIITAAIGSFFFLLILRRRKLSN

Sequences:

>Translated_382_residues
MIDTLKLVTMNFFSHIFTPLTRQQWLILGLAGFALLTPIAAASFGAANISFLDVLHVFINKLSQLFMADEAVSSSSMTER
IVMELRLPRILLAFVAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLFTSSGLFGNGGAIANSGIFSGSG
SFAGLLWLSLPFGAFIGASLSVLIVLALAGLGLKSQVERMLLSGVATSFMFGALTSLLLYFASPQATASVLFWSLGSFAK
ASWSLLVLPSLVVLVSFLIILGWKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGLMIPHTV
RLLFPGRQPILLTGLVGGLFMVWIDVLARCLLGNQELPVGIITAAIGSFFFLLILRRRKLSN
>Mature_382_residues
MIDTLKLVTMNFFSHIFTPLTRQQWLILGLAGFALLTPIAAASFGAANISFLDVLHVFINKLSQLFMADEAVSSSSMTER
IVMELRLPRILLAFVAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLFTSSGLFGNGGAIANSGIFSGSG
SFAGLLWLSLPFGAFIGASLSVLIVLALAGLGLKSQVERMLLSGVATSFMFGALTSLLLYFASPQATASVLFWSLGSFAK
ASWSLLVLPSLVVLVSFLIILGWKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGLMIPHTV
RLLFPGRQPILLTGLVGGLFMVWIDVLARCLLGNQELPVGIITAAIGSFFFLLILRRRKLSN

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=301, Percent_Identity=34.5514950166113, Blast_Score=127, Evalue=9e-31,
Organism=Escherichia coli, GI1790741, Length=310, Percent_Identity=33.8709677419355, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI1786347, Length=309, Percent_Identity=34.6278317152104, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1788004, Length=301, Percent_Identity=30.8970099667774, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1786804, Length=325, Percent_Identity=30.7692307692308, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1786805, Length=300, Percent_Identity=33, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 40488; Mature: 40488

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDTLKLVTMNFFSHIFTPLTRQQWLILGLAGFALLTPIAAASFGAANISFLDVLHVFIN
CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KLSQLFMADEAVSSSSMTERIVMELRLPRILLAFVAGAGLSLAGSVLQTVTRNPLADPYL
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCE
FGISSGASFGAVVMLTLFTSSGLFGNGGAIANSGIFSGSGSFAGLLWLSLPFGAFIGASL
EECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHH
SVLIVLALAGLGLKSQVERMLLSGVATSFMFGALTSLLLYFASPQATASVLFWSLGSFAK
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ASWSLLVLPSLVVLVSFLIILGWKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHH
ILVATCGGIGFVGLMIPHTVRLLFPGRQPILLTGLVGGLFMVWIDVLARCLLGNQELPVG
HHHHHCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
IITAAIGSFFFLLILRRRKLSN
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIDTLKLVTMNFFSHIFTPLTRQQWLILGLAGFALLTPIAAASFGAANISFLDVLHVFIN
CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KLSQLFMADEAVSSSSMTERIVMELRLPRILLAFVAGAGLSLAGSVLQTVTRNPLADPYL
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCE
FGISSGASFGAVVMLTLFTSSGLFGNGGAIANSGIFSGSGSFAGLLWLSLPFGAFIGASL
EECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHH
SVLIVLALAGLGLKSQVERMLLSGVATSFMFGALTSLLLYFASPQATASVLFWSLGSFAK
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ASWSLLVLPSLVVLVSFLIILGWKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHH
ILVATCGGIGFVGLMIPHTVRLLFPGRQPILLTGLVGGLFMVWIDVLARCLLGNQELPVG
HHHHHCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
IITAAIGSFFFLLILRRRKLSN
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]