| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113969155
Identifier: 113969155
GI number: 113969155
Start: 946703
End: 946993
Strand: Direct
Name: 113969155
Synonym: Shewmr4_0811
Alternate gene names: NA
Gene position: 946703-946993 (Clockwise)
Preceding gene: 113969154
Following gene: 113969159
Centisome position: 20.12
GC content: 49.14
Gene sequence:
>291_bases ATGTTCCCGTATCCAGAGCAGTATCGTGTTGCCACGCCACCTTTAACCACGGCGCTGATGGTGGCTTGGGCGCTGTTGAG TCACAGTTTGTTAGCCGATGCCAGCCCTTTTGCCTTGTATCCGTTATTTATGTTGTTCCCCGTGGTGATTGGCCTGCATC TGTATTTGATTTGGCTGGCGAAGGGAATGAGTCGGTTGGATCAATGCTTCTACGCCTTAGTGCATATTCCGCTTGCCTTT GTGGTGTGGACATTCACCATTATGCATGTCAATGGTAATGCCTTTTCTTAG
Upstream 100 bases:
>100_bases GAAAGTGCTAAGGCGCAGCGGATCGCACGAAAACCCTAGACGTCACCCCATCGCGGGGCGACTGACCAAATCAGTATTGA AGAAGTGTAAGAGGCCAAGG
Downstream 100 bases:
>100_bases GGCTGAACCCTGTAGTGCCTCAGAACAGTCCGTTAAAATGGCTTTCATCCATTCAAAGCCTTAAACAAAAAAGCGCCCCG ATGTTCGGGGCGCTTTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MFPYPEQYRVATPPLTTALMVAWALLSHSLLADASPFALYPLFMLFPVVIGLHLYLIWLAKGMSRLDQCFYALVHIPLAF VVWTFTIMHVNGNAFS
Sequences:
>Translated_96_residues MFPYPEQYRVATPPLTTALMVAWALLSHSLLADASPFALYPLFMLFPVVIGLHLYLIWLAKGMSRLDQCFYALVHIPLAF VVWTFTIMHVNGNAFS >Mature_96_residues MFPYPEQYRVATPPLTTALMVAWALLSHSLLADASPFALYPLFMLFPVVIGLHLYLIWLAKGMSRLDQCFYALVHIPLAF VVWTFTIMHVNGNAFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10889; Mature: 10889
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPYPEQYRVATPPLTTALMVAWALLSHSLLADASPFALYPLFMLFPVVIGLHLYLIWLA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KGMSRLDQCFYALVHIPLAFVVWTFTIMHVNGNAFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MFPYPEQYRVATPPLTTALMVAWALLSHSLLADASPFALYPLFMLFPVVIGLHLYLIWLA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KGMSRLDQCFYALVHIPLAFVVWTFTIMHVNGNAFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA