| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113969114
Identifier: 113969114
GI number: 113969114
Start: 896210
End: 896551
Strand: Direct
Name: 113969114
Synonym: Shewmr4_0770
Alternate gene names: NA
Gene position: 896210-896551 (Clockwise)
Preceding gene: 113969113
Following gene: 113969117
Centisome position: 19.04
GC content: 50.88
Gene sequence:
>342_bases GTGACTAATACTTTAGTCAGCACCCTGCTGACGACATACGCCAATGTGAGCTTGTCGGCTTGGGATAATTTGCGAGTCTT GCTATCCGAGTGTGCGTTGCAGCAATGTGAAGCCCGTGGATTTGAAGTCGATTGCGACGACAGTCGCCCCCATTATTGGC TGCAGATTGAAGATTGTTGGCTCGATTGTGGCAAAACCAATGCATACAGCGCGGCTATCGTCCGTTTAGCGCCTGAGACC GTTAAGGGCGCAAGGATAATCGGCGTGCAAGACTGTGCACTGTTATCCGCCGCGCAGATAAACCTCTTGTGTATGCAAAA CGCCCACTTTGACCACTGTTAA
Upstream 100 bases:
>100_bases GAGTTTGTCAAAGAGGCGGGTGTGGGTTATGTGCAGGGCTGGTTATACGCCAAAGCGATGCCAGGCCCCGAGGCCAAAGC CTTTTGGTTGGAGAGAAATA
Downstream 100 bases:
>100_bases TCCGGATTACAGGATTAACCATTTCCCCGTCGGGTAATTTCCTTGATAGCCAAAAGGAAGCCGTCCCTGCAAGTACCAGG CTAAACGTTCTTGTGTGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MTNTLVSTLLTTYANVSLSAWDNLRVLLSECALQQCEARGFEVDCDDSRPHYWLQIEDCWLDCGKTNAYSAAIVRLAPET VKGARIIGVQDCALLSAAQINLLCMQNAHFDHC
Sequences:
>Translated_113_residues MTNTLVSTLLTTYANVSLSAWDNLRVLLSECALQQCEARGFEVDCDDSRPHYWLQIEDCWLDCGKTNAYSAAIVRLAPET VKGARIIGVQDCALLSAAQINLLCMQNAHFDHC >Mature_112_residues TNTLVSTLLTTYANVSLSAWDNLRVLLSECALQQCEARGFEVDCDDSRPHYWLQIEDCWLDCGKTNAYSAAIVRLAPETV KGARIIGVQDCALLSAAQINLLCMQNAHFDHC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12537; Mature: 12406
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 7.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTLVSTLLTTYANVSLSAWDNLRVLLSECALQQCEARGFEVDCDDSRPHYWLQIEDCW CCHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEEEEEE LDCGKTNAYSAAIVRLAPETVKGARIIGVQDCALLSAAQINLLCMQNAHFDHC EECCCCCCCEEEEEEECCCCCCCEEEEECCHHHHHHHHHEEEEEECCCCCCCC >Mature Secondary Structure TNTLVSTLLTTYANVSLSAWDNLRVLLSECALQQCEARGFEVDCDDSRPHYWLQIEDCW CHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEEEEEE LDCGKTNAYSAAIVRLAPETVKGARIIGVQDCALLSAAQINLLCMQNAHFDHC EECCCCCCCEEEEEEECCCCCCCEEEEECCHHHHHHHHHEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA