Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

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The map label for this gene is 113969083

Identifier: 113969083

GI number: 113969083

Start: 859661

End: 860071

Strand: Direct

Name: 113969083

Synonym: Shewmr4_0739

Alternate gene names: NA

Gene position: 859661-860071 (Clockwise)

Preceding gene: 113969082

Following gene: 113969086

Centisome position: 18.27

GC content: 50.12

Gene sequence:

>411_bases
ATGCAATCTATAGCATCCTTGGAGGGCGGCTGTTTATGTGGGGCGATTCGTTATCGGATTGAGGGTAAGCCCTTCGACGC
CGATTATTGCCATTGCCGCATGTGCCAAAAAAGCATTGGGGCCGTGTTTGGCGCCTGGATGGATTTTAAGCTGCATCAGG
TGACTTGGCTTAAGGGCAAAGTGACGGAGTTTGCTTCATCTGAGTGTGTGAGACGCGGTTTTTGTGCCCACTGCGGCTGC
TCGCTGACCTACAGGCACACTGAATATCCCGACTATCTCACCCTGACGATCGCAAGCTTAGATGATCCTGAACTGGTGCA
GCCTAATTACCATATTTATACCGATGAGCAACCAAGTTGGCTCAAGATTGAGGATAACTGTCAGCGTTATCCTCAGGCTC
GGACTAAGTAA

Upstream 100 bases:

>100_bases
CAATCCGCAGCTGTCGATTTATGGCATTACCGCGCGCAATGCCACGGCGCTGGCGCAAAAGCTGACCGATGGCCGAGAGC
CGCAATAGCGTGGAGTCTGC

Downstream 100 bases:

>100_bases
GCTAACGTTTGGTCTATTAAGGCGCGATAAAATTCAGCGAATTTACATCGGCTGGGGATAGGCCAAACAGGGTCAGGTAA
CTCACCAGATTGGTTTGTGC

Product: glutathione-dependent formaldehyde-activating, GFA

Products: NA

Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Family; Glutathione-Dependent Formaldehyde-Activating Gfa; Glutathione-Dependent Formaldehyde-Activating Protein GFA; ATPase; Lipoprotein

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MQSIASLEGGCLCGAIRYRIEGKPFDADYCHCRMCQKSIGAVFGAWMDFKLHQVTWLKGKVTEFASSECVRRGFCAHCGC
SLTYRHTEYPDYLTLTIASLDDPELVQPNYHIYTDEQPSWLKIEDNCQRYPQARTK

Sequences:

>Translated_136_residues
MQSIASLEGGCLCGAIRYRIEGKPFDADYCHCRMCQKSIGAVFGAWMDFKLHQVTWLKGKVTEFASSECVRRGFCAHCGC
SLTYRHTEYPDYLTLTIASLDDPELVQPNYHIYTDEQPSWLKIEDNCQRYPQARTK
>Mature_136_residues
MQSIASLEGGCLCGAIRYRIEGKPFDADYCHCRMCQKSIGAVFGAWMDFKLHQVTWLKGKVTEFASSECVRRGFCAHCGC
SLTYRHTEYPDYLTLTIASLDDPELVQPNYHIYTDEQPSWLKIEDNCQRYPQARTK

Specific function: Unknown

COG id: COG3791

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15615; Mature: 15615

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
7.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSIASLEGGCLCGAIRYRIEGKPFDADYCHCRMCQKSIGAVFGAWMDFKLHQVTWLKGK
CCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCH
VTEFASSECVRRGFCAHCGCSLTYRHTEYPDYLTLTIASLDDPELVQPNYHIYTDEQPSW
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCEECCCEEEEECCCCCE
LKIEDNCQRYPQARTK
EEECCCHHHCCCCCCC
>Mature Secondary Structure
MQSIASLEGGCLCGAIRYRIEGKPFDADYCHCRMCQKSIGAVFGAWMDFKLHQVTWLKGK
CCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCH
VTEFASSECVRRGFCAHCGCSLTYRHTEYPDYLTLTIASLDDPELVQPNYHIYTDEQPSW
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCEECCCEEEEECCCCCE
LKIEDNCQRYPQARTK
EEECCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA