| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113969083
Identifier: 113969083
GI number: 113969083
Start: 859661
End: 860071
Strand: Direct
Name: 113969083
Synonym: Shewmr4_0739
Alternate gene names: NA
Gene position: 859661-860071 (Clockwise)
Preceding gene: 113969082
Following gene: 113969086
Centisome position: 18.27
GC content: 50.12
Gene sequence:
>411_bases ATGCAATCTATAGCATCCTTGGAGGGCGGCTGTTTATGTGGGGCGATTCGTTATCGGATTGAGGGTAAGCCCTTCGACGC CGATTATTGCCATTGCCGCATGTGCCAAAAAAGCATTGGGGCCGTGTTTGGCGCCTGGATGGATTTTAAGCTGCATCAGG TGACTTGGCTTAAGGGCAAAGTGACGGAGTTTGCTTCATCTGAGTGTGTGAGACGCGGTTTTTGTGCCCACTGCGGCTGC TCGCTGACCTACAGGCACACTGAATATCCCGACTATCTCACCCTGACGATCGCAAGCTTAGATGATCCTGAACTGGTGCA GCCTAATTACCATATTTATACCGATGAGCAACCAAGTTGGCTCAAGATTGAGGATAACTGTCAGCGTTATCCTCAGGCTC GGACTAAGTAA
Upstream 100 bases:
>100_bases CAATCCGCAGCTGTCGATTTATGGCATTACCGCGCGCAATGCCACGGCGCTGGCGCAAAAGCTGACCGATGGCCGAGAGC CGCAATAGCGTGGAGTCTGC
Downstream 100 bases:
>100_bases GCTAACGTTTGGTCTATTAAGGCGCGATAAAATTCAGCGAATTTACATCGGCTGGGGATAGGCCAAACAGGGTCAGGTAA CTCACCAGATTGGTTTGTGC
Product: glutathione-dependent formaldehyde-activating, GFA
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Family; Glutathione-Dependent Formaldehyde-Activating Gfa; Glutathione-Dependent Formaldehyde-Activating Protein GFA; ATPase; Lipoprotein
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MQSIASLEGGCLCGAIRYRIEGKPFDADYCHCRMCQKSIGAVFGAWMDFKLHQVTWLKGKVTEFASSECVRRGFCAHCGC SLTYRHTEYPDYLTLTIASLDDPELVQPNYHIYTDEQPSWLKIEDNCQRYPQARTK
Sequences:
>Translated_136_residues MQSIASLEGGCLCGAIRYRIEGKPFDADYCHCRMCQKSIGAVFGAWMDFKLHQVTWLKGKVTEFASSECVRRGFCAHCGC SLTYRHTEYPDYLTLTIASLDDPELVQPNYHIYTDEQPSWLKIEDNCQRYPQARTK >Mature_136_residues MQSIASLEGGCLCGAIRYRIEGKPFDADYCHCRMCQKSIGAVFGAWMDFKLHQVTWLKGKVTEFASSECVRRGFCAHCGC SLTYRHTEYPDYLTLTIASLDDPELVQPNYHIYTDEQPSWLKIEDNCQRYPQARTK
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15615; Mature: 15615
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 7.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSIASLEGGCLCGAIRYRIEGKPFDADYCHCRMCQKSIGAVFGAWMDFKLHQVTWLKGK CCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCH VTEFASSECVRRGFCAHCGCSLTYRHTEYPDYLTLTIASLDDPELVQPNYHIYTDEQPSW HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCEECCCEEEEECCCCCE LKIEDNCQRYPQARTK EEECCCHHHCCCCCCC >Mature Secondary Structure MQSIASLEGGCLCGAIRYRIEGKPFDADYCHCRMCQKSIGAVFGAWMDFKLHQVTWLKGK CCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCH VTEFASSECVRRGFCAHCGCSLTYRHTEYPDYLTLTIASLDDPELVQPNYHIYTDEQPSW HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCEECCCEEEEECCCCCE LKIEDNCQRYPQARTK EEECCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA