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The map label for this gene is petC [H]

Identifier: 113968948

GI number: 113968948

Start: 697470

End: 698168

Strand: Direct

Name: petC [H]

Synonym: Shewmr4_0604

Alternate gene names: 113968948

Gene position: 697470-698168 (Clockwise)

Preceding gene: 113968947

Following gene: 113968949

Centisome position: 14.82

GC content: 45.35

Gene sequence:

>699_bases
ATGAAAAAATTACTGATTGCATTAGTTACATTGCTCCCGACGCTGGCGATGGCCGCGAGCGGACACAATGTACATTTAGA
AAAAGCCAATGTTGATTTGCATGATAAGGCTTCTTTAGAGCGTGGTCTGGATATGTTCCAACACTATTGCTCTGGTTGTC
ATAGCACTCAGTATCAACGCTATGAACGTGTGGCGAACGATCTCGGTATTTCTGCCGATGATATGCGTAACAAGTATATG
TTTACCGATGCTAAAATCGGTGAGCTGATGCAAAACGCGATTCCACACAAAGATGCGGCTAAATGGTTTGGTGCAACACC
ACCAGACTTAACCTTAGTAGCACGTGTTCGTGGCGAAGATTGGGTGTATTCATACCTCAAAGGCTTCTACAAAGACCCAA
GCCGTCCATTCGGCGTCAACAATACTGTCTTCCCATCTGTGGGTATGCCACACGTTCTTGAAGAACTGCAAGGCACACCT
GTTAAGCAAGAAGATGGCACTATTGTGGTCTCAGGTGGTAAGTTAAACGCAGAAGAGTACGACCAAGCAGTTCGTGATAT
CACTGGCTTCTTAGTCTATTCGGCTGAACCTGTTAAGTTAGAGCGTCAAGCGCTAGGTTGGTGGGTGCTCGGATTCCTGT
TTATCTTCTTTATTGTGGCCTACCTCTTGAAGAAAGAGTACTGGAAAGATGTACACTAG

Upstream 100 bases:

>100_bases
CACGTATCTTCACTGTAACGTATTTCGGCTACTTCTTATTACTGTGGTTATATAGTAAAAATGAGAAAACTAAGCCTGTT
CCAGCGAGGTTGACACACTA

Downstream 100 bases:

>100_bases
GCACCAATAACGGGTAAAATATAGTATCCGCATAGTGTAAACGGGGGGCTTTGCCCCTCGTTTACTTTTGTTTTATTTCG
ACTCTGGAGGGTATCAATGG

Product: cytochrome c1

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKKLLIALVTLLPTLAMAASGHNVHLEKANVDLHDKASLERGLDMFQHYCSGCHSTQYQRYERVANDLGISADDMRNKYM
FTDAKIGELMQNAIPHKDAAKWFGATPPDLTLVARVRGEDWVYSYLKGFYKDPSRPFGVNNTVFPSVGMPHVLEELQGTP
VKQEDGTIVVSGGKLNAEEYDQAVRDITGFLVYSAEPVKLERQALGWWVLGFLFIFFIVAYLLKKEYWKDVH

Sequences:

>Translated_232_residues
MKKLLIALVTLLPTLAMAASGHNVHLEKANVDLHDKASLERGLDMFQHYCSGCHSTQYQRYERVANDLGISADDMRNKYM
FTDAKIGELMQNAIPHKDAAKWFGATPPDLTLVARVRGEDWVYSYLKGFYKDPSRPFGVNNTVFPSVGMPHVLEELQGTP
VKQEDGTIVVSGGKLNAEEYDQAVRDITGFLVYSAEPVKLERQALGWWVLGFLFIFFIVAYLLKKEYWKDVH
>Mature_232_residues
MKKLLIALVTLLPTLAMAASGHNVHLEKANVDLHDKASLERGLDMFQHYCSGCHSTQYQRYERVANDLGISADDMRNKYM
FTDAKIGELMQNAIPHKDAAKWFGATPPDLTLVARVRGEDWVYSYLKGFYKDPSRPFGVNNTVFPSVGMPHVLEELQGTP
VKQEDGTIVVSGGKLNAEEYDQAVRDITGFLVYSAEPVKLERQALGWWVLGFLFIFFIVAYLLKKEYWKDVH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6324639, Length=252, Percent_Identity=28.1746031746032, Blast_Score=77, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24658292, Length=248, Percent_Identity=27.4193548387097, Blast_Score=82, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 26274; Mature: 26274

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLIALVTLLPTLAMAASGHNVHLEKANVDLHDKASLERGLDMFQHYCSGCHSTQYQR
CHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
YERVANDLGISADDMRNKYMFTDAKIGELMQNAIPHKDAAKWFGATPPDLTLVARVRGED
HHHHHHHCCCCHHHHCCCEEECHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEECCCH
WVYSYLKGFYKDPSRPFGVNNTVFPSVGMPHVLEELQGTPVKQEDGTIVVSGGKLNAEEY
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCHHHH
DQAVRDITGFLVYSAEPVKLERQALGWWVLGFLFIFFIVAYLLKKEYWKDVH
HHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKLLIALVTLLPTLAMAASGHNVHLEKANVDLHDKASLERGLDMFQHYCSGCHSTQYQR
CHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
YERVANDLGISADDMRNKYMFTDAKIGELMQNAIPHKDAAKWFGATPPDLTLVARVRGED
HHHHHHHCCCCHHHHCCCEEECHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEECCCH
WVYSYLKGFYKDPSRPFGVNNTVFPSVGMPHVLEELQGTPVKQEDGTIVVSGGKLNAEEY
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCHHHH
DQAVRDITGFLVYSAEPVKLERQALGWWVLGFLFIFFIVAYLLKKEYWKDVH
HHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA