| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
Click here to switch to the map view.
The map label for this gene is 113968858
Identifier: 113968858
GI number: 113968858
Start: 592907
End: 593110
Strand: Direct
Name: 113968858
Synonym: Shewmr4_0514
Alternate gene names: NA
Gene position: 592907-593110 (Clockwise)
Preceding gene: 113968857
Following gene: 113968859
Centisome position: 12.6
GC content: 49.51
Gene sequence:
>204_bases ATGTCTTTGTTGAAAACTATGACTGCCAAACCGACCGCTAAATTAGGCGCTATCGCCCTAGTGTTGGCCTTTACCGCAGG CTTAAGTGCCTGTGCGCCAGAGGTGGGCAGTGAAGCTTGGTGTAAGCAAATGAAGGATAAACCTTCTGGCGATTGGACGG CGAACGAAGCGGCCGATTACGCTAAACACTGCGTGTTTAAATAA
Upstream 100 bases:
>100_bases TTGGTTCCCCTTAGAACAAAAAGCCAAAGCCATCGACTGGATTGCGAAACGTTCAACTTTTTAACGGCCCATGGTGGGTA TTACTTATAAGGAATTAACT
Downstream 100 bases:
>100_bases GCTTTTCAAGCTAGTAGCGTCACAGCTTGGCTTCTTTTTAGTTGCAAGCTGTGAACTTATGCTTAGAATCCCTGTCTGAA GTTGCACAAGCTATTGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 67; Mature: 66
Protein sequence:
>67_residues MSLLKTMTAKPTAKLGAIALVLAFTAGLSACAPEVGSEAWCKQMKDKPSGDWTANEAADYAKHCVFK
Sequences:
>Translated_67_residues MSLLKTMTAKPTAKLGAIALVLAFTAGLSACAPEVGSEAWCKQMKDKPSGDWTANEAADYAKHCVFK >Mature_66_residues SLLKTMTAKPTAKLGAIALVLAFTAGLSACAPEVGSEAWCKQMKDKPSGDWTANEAADYAKHCVFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7075; Mature: 6944
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLKTMTAKPTAKLGAIALVLAFTAGLSACAPEVGSEAWCKQMKDKPSGDWTANEAADY CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHH AKHCVFK HHHHCCC >Mature Secondary Structure SLLKTMTAKPTAKLGAIALVLAFTAGLSACAPEVGSEAWCKQMKDKPSGDWTANEAADY CCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHH AKHCVFK HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA