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The map label for this gene is 113968848

Identifier: 113968848

GI number: 113968848

Start: 584225

End: 585238

Strand: Direct

Name: 113968848

Synonym: Shewmr4_0504

Alternate gene names: NA

Gene position: 584225-585238 (Clockwise)

Preceding gene: 113968846

Following gene: 113968851

Centisome position: 12.41

GC content: 46.94

Gene sequence:

>1014_bases
ATGAAAGTTACACTAATAGGAATTGATCTCGCAAAAAATATCTTCCAAGTATGTGGGGTAAATCAAGCTGGCAAGAGTGT
TTTTAACCGTTCGATTAAACGTGCTCAGCTCCTTACTTTTCTGCGTACTTACCCTGATGCCACTATTGCGATGGAAGCCT
GCAGTGGCTCTAACTATTGGGGCAGAGAGTTACTTTCTCTCGGGCATGACGTCAAACTGATCCCGCCTCAGCATGTTAAG
CCATTTGTCAAAGGCAATAAGAACGATCGCAATGATGCCTTCGCTATCTGTGAGGCGGCGCAGAGACCGAACCTGATTTT
CGTCCAGCCGAGAACCTTAGCGCAGGTTGATATCATCATTACTCACAGAATTCGCGAGCGCCGGATCAGAATACGCACTG
CACTAACCAATCAAATCAGAGGTTTACTAAGTGAATATGGAATAGCCCTCCCTAAAGGACGTAATCCATTGAATCTTTTA
CTGCCGGAATTACTTGAGGATGCCAGTAATCAACTCACTACGATTGCACGCCAATACATGCGTGAGCTGATGGAAGAGTT
GCGTGCGATCAACGTTGCAATAGGTTCACTGGAAAAAGACATCAAACTGCAGGCAAGAACGCACCCAGATGCCAAGCGAC
TAATGGGTATAAGAGGCGTTGCAGAAATCATTGCCACTGCCGCGGTGTCATTTGCCGGAGATGGCTCTGGCTATCATGGT
GCTCGGCATTTTTCTGCAAATTTAGGACTGGTTCCTAAAGAGTTTTCCAGTGGGGGAAAACAGAAATTAAGCGGCATAAC
CAAACGAGGTAACAGCTATCTGCGGCGGCAACTGATCCAGGGAGCTTGGTCGATTATTCGCTATGCAAGTAAGAGTAATG
ACAGGATCTCCGTATGGGCCTTAAAGGTGATTGAGCGGCGGGGTAAACAGAAAGCGGCAGTAGCAATTGCAAACAAATTG
GCGCGGATCATTTGGGCGCTGCTGTTTCATCGCAGCGAATATCGGTCTTGTTAA

Upstream 100 bases:

>100_bases
CCGAGCATACATGGATGATGGGATGGACACCTCTTGTGAAGTAGGCGTCATTTACGCCATATTGAATTTGCACGTTCAAT
AACAACAAAAGGTGTCCAAA

Downstream 100 bases:

>100_bases
TTTGTAAAAATCGAGTATTAAACTCACCCCAAAAACACGACTACAGATAATGAAGTAACAGGTAATACCGGCCTTTGCAG
ATGCTGAGAGAGTACAAGGA

Product: transposase IS116/IS110/IS902 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKVTLIGIDLAKNIFQVCGVNQAGKSVFNRSIKRAQLLTFLRTYPDATIAMEACSGSNYWGRELLSLGHDVKLIPPQHVK
PFVKGNKNDRNDAFAICEAAQRPNLIFVQPRTLAQVDIIITHRIRERRIRIRTALTNQIRGLLSEYGIALPKGRNPLNLL
LPELLEDASNQLTTIARQYMRELMEELRAINVAIGSLEKDIKLQARTHPDAKRLMGIRGVAEIIATAAVSFAGDGSGYHG
ARHFSANLGLVPKEFSSGGKQKLSGITKRGNSYLRRQLIQGAWSIIRYASKSNDRISVWALKVIERRGKQKAAVAIANKL
ARIIWALLFHRSEYRSC

Sequences:

>Translated_337_residues
MKVTLIGIDLAKNIFQVCGVNQAGKSVFNRSIKRAQLLTFLRTYPDATIAMEACSGSNYWGRELLSLGHDVKLIPPQHVK
PFVKGNKNDRNDAFAICEAAQRPNLIFVQPRTLAQVDIIITHRIRERRIRIRTALTNQIRGLLSEYGIALPKGRNPLNLL
LPELLEDASNQLTTIARQYMRELMEELRAINVAIGSLEKDIKLQARTHPDAKRLMGIRGVAEIIATAAVSFAGDGSGYHG
ARHFSANLGLVPKEFSSGGKQKLSGITKRGNSYLRRQLIQGAWSIIRYASKSNDRISVWALKVIERRGKQKAAVAIANKL
ARIIWALLFHRSEYRSC
>Mature_337_residues
MKVTLIGIDLAKNIFQVCGVNQAGKSVFNRSIKRAQLLTFLRTYPDATIAMEACSGSNYWGRELLSLGHDVKLIPPQHVK
PFVKGNKNDRNDAFAICEAAQRPNLIFVQPRTLAQVDIIITHRIRERRIRIRTALTNQIRGLLSEYGIALPKGRNPLNLL
LPELLEDASNQLTTIARQYMRELMEELRAINVAIGSLEKDIKLQARTHPDAKRLMGIRGVAEIIATAAVSFAGDGSGYHG
ARHFSANLGLVPKEFSSGGKQKLSGITKRGNSYLRRQLIQGAWSIIRYASKSNDRISVWALKVIERRGKQKAAVAIANKL
ARIIWALLFHRSEYRSC

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 37672; Mature: 37672

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTLIGIDLAKNIFQVCGVNQAGKSVFNRSIKRAQLLTFLRTYPDATIAMEACSGSNYW
CEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCHH
GRELLSLGHDVKLIPPQHVKPFVKGNKNDRNDAFAICEAAQRPNLIFVQPRTLAQVDIII
HHHHHHCCCCEEECCHHHCCHHHCCCCCCCCHHHHHHHHCCCCCEEEECCCCHHHHHHHH
THRIRERRIRIRTALTNQIRGLLSEYGIALPKGRNPLNLLLPELLEDASNQLTTIARQYM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RELMEELRAINVAIGSLEKDIKLQARTHPDAKRLMGIRGVAEIIATAAVSFAGDGSGYHG
HHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
ARHFSANLGLVPKEFSSGGKQKLSGITKRGNSYLRRQLIQGAWSIIRYASKSNDRISVWA
CCEECCCCCCCCHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH
LKVIERRGKQKAAVAIANKLARIIWALLFHRSEYRSC
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKVTLIGIDLAKNIFQVCGVNQAGKSVFNRSIKRAQLLTFLRTYPDATIAMEACSGSNYW
CEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCHH
GRELLSLGHDVKLIPPQHVKPFVKGNKNDRNDAFAICEAAQRPNLIFVQPRTLAQVDIII
HHHHHHCCCCEEECCHHHCCHHHCCCCCCCCHHHHHHHHCCCCCEEEECCCCHHHHHHHH
THRIRERRIRIRTALTNQIRGLLSEYGIALPKGRNPLNLLLPELLEDASNQLTTIARQYM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RELMEELRAINVAIGSLEKDIKLQARTHPDAKRLMGIRGVAEIIATAAVSFAGDGSGYHG
HHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
ARHFSANLGLVPKEFSSGGKQKLSGITKRGNSYLRRQLIQGAWSIIRYASKSNDRISVWA
CCEECCCCCCCCHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH
LKVIERRGKQKAAVAIANKLARIIWALLFHRSEYRSC
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1324903; 12704232 [H]