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The map label for this gene is 113968846

Identifier: 113968846

GI number: 113968846

Start: 580981

End: 581607

Strand: Direct

Name: 113968846

Synonym: Shewmr4_0502

Alternate gene names: NA

Gene position: 580981-581607 (Clockwise)

Preceding gene: 113968845

Following gene: 113968848

Centisome position: 12.34

GC content: 53.59

Gene sequence:

>627_bases
ATGACTACAGAACGCTATTTTTACGAGCCGAGCAAGGGACATGGACTATCGCACGATCCCTTAAATGCGATTGTCGCCCC
CAGACCCATAGGCTGGATCTCCTCGCGCAGTGCCCAGGGGCAACGCAATCTCGCGCCCTATAGTTTTTTCAATTGTTTCA
ACTACAAACCACCGATCATTGGCTTTGCCAGCACGGGCTGGAAGGACAGTGTCGCCAATATCGTCGACACTGGCGAGTTC
GTCTGGAACCTCACCACCCGCAGCCTTGCCGAGAAAATGAATCAAACTTCCGCCATGTTACCCCGCGGGGAGGATGAGTT
TGCCTTTGCCGGACTCACCCCCAAGGCGGGCACTATCGTCCAAGCTGAGCTGGTGGCCGAAAGCCCGGTCAACTTTGAAT
GTAAGCTGTCTCAATGTATTCAATTAACTGCCGCCAATGGGGATAAGATTGATACTTGGCTCGTCTTAGGTGAAGTGGTC
GCGGTGCATATCGCCAAGCATTTGCTCAATAGTGAAGGTGTGTATCAAACCGCCCTCGCCGAACCCGTGCTGCGCGCAGG
CGGCCCATCGGCTTACTATGGGATCTCCGAAGATCTGCGTTTCGATCTACATAGACCACAAGTGTAG

Upstream 100 bases:

>100_bases
TTGGATTAATATCCAGTTTTATTCGACTCATTCACGGGGTAATATGGATCCCATTCGCGCATGCTAAGCTTTATTGGGCA
CAAATCGACAGGGGATGAAG

Downstream 100 bases:

>100_bases
GTGGTGGTACTCAAACTTCGTTTGAGTTTTTAAAGCAAAATCAACGTCGTGGGGCTTCACCCCCTATTTTTTATAAAGAG
CCGACCAAAAGGGGAAAAGC

Product: flavoprotein oxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MTTERYFYEPSKGHGLSHDPLNAIVAPRPIGWISSRSAQGQRNLAPYSFFNCFNYKPPIIGFASTGWKDSVANIVDTGEF
VWNLTTRSLAEKMNQTSAMLPRGEDEFAFAGLTPKAGTIVQAELVAESPVNFECKLSQCIQLTAANGDKIDTWLVLGEVV
AVHIAKHLLNSEGVYQTALAEPVLRAGGPSAYYGISEDLRFDLHRPQV

Sequences:

>Translated_208_residues
MTTERYFYEPSKGHGLSHDPLNAIVAPRPIGWISSRSAQGQRNLAPYSFFNCFNYKPPIIGFASTGWKDSVANIVDTGEF
VWNLTTRSLAEKMNQTSAMLPRGEDEFAFAGLTPKAGTIVQAELVAESPVNFECKLSQCIQLTAANGDKIDTWLVLGEVV
AVHIAKHLLNSEGVYQTALAEPVLRAGGPSAYYGISEDLRFDLHRPQV
>Mature_207_residues
TTERYFYEPSKGHGLSHDPLNAIVAPRPIGWISSRSAQGQRNLAPYSFFNCFNYKPPIIGFASTGWKDSVANIVDTGEFV
WNLTTRSLAEKMNQTSAMLPRGEDEFAFAGLTPKAGTIVQAELVAESPVNFECKLSQCIQLTAANGDKIDTWLVLGEVVA
VHIAKHLLNSEGVYQTALAEPVLRAGGPSAYYGISEDLRFDLHRPQV

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 22819; Mature: 22688

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTERYFYEPSKGHGLSHDPLNAIVAPRPIGWISSRSAQGQRNLAPYSFFNCFNYKPPII
CCCCCEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEE
GFASTGWKDSVANIVDTGEFVWNLTTRSLAEKMNQTSAMLPRGEDEFAFAGLTPKAGTIV
EECCCCCHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEE
QAELVAESPVNFECKLSQCIQLTAANGDKIDTWLVLGEVVAVHIAKHLLNSEGVYQTALA
EEEEHHCCCCCEEEEHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
EPVLRAGGPSAYYGISEDLRFDLHRPQV
HHHHHCCCCCEECCCCCCCEECCCCCCC
>Mature Secondary Structure 
TTERYFYEPSKGHGLSHDPLNAIVAPRPIGWISSRSAQGQRNLAPYSFFNCFNYKPPII
CCCCEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEE
GFASTGWKDSVANIVDTGEFVWNLTTRSLAEKMNQTSAMLPRGEDEFAFAGLTPKAGTIV
EECCCCCHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEE
QAELVAESPVNFECKLSQCIQLTAANGDKIDTWLVLGEVVAVHIAKHLLNSEGVYQTALA
EEEEHHCCCCCEEEEHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
EPVLRAGGPSAYYGISEDLRFDLHRPQV
HHHHHCCCCCEECCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]