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The map label for this gene is ydiK [C]

Identifier: 113968823

GI number: 113968823

Start: 545166

End: 546284

Strand: Direct

Name: ydiK [C]

Synonym: Shewmr4_0479

Alternate gene names: 113968823

Gene position: 545166-546284 (Clockwise)

Preceding gene: 113968822

Following gene: 113968826

Centisome position: 11.58

GC content: 51.74

Gene sequence:

>1119_bases
ATGGCACAGATTATCAGTAATGCTGCGGTGGGTCGTACCCTATTGATTTTATTGCTGTGTGCTGGTGTTTTCTTTTTTAT
CGATTTTTTAGTTCCCGCCTTGGCCGCCCTGATCGTCTGCTTCTCCAGTTGGCCGTTGTATCAAAAATTAATGGTTAAAT
GCGGTGGTCGCTCGGCGCTGTCTGCCACTATCGCGTTAGTCTTGATTATTCTTGGGCTTATTACGCCGCTGATTTTTGTA
TTTTCCTATGCTTTACAAGAGATTAGAGCCTGGGTGGAGTGGCTGGTGTATGCCAACCAGCATGGCGCTCCTGTGCCGCT
GTGGATTAAGGATTTACCTTGGATTGGCGAGTGGCTCACCCTGCAATGGCAGCAGTTTATCGGTGAACCCCATGAGCTGG
GCAAGATAGTCAGCGCGATCAGTGGCCAGAATCTGAGTGGCATTTCCCGCTGGGTACTGCAATTGGGCTGGAATACCTTG
GGCCTGCTGCTGACTCTTCTCTTTATGCTGATTACCTTGTTTTTCTTATATAAAGATGGCGAGTCGGTGGCCAAGCAGTT
GGATATTGTTGGCGAGCGCATTCTTCCTGCCCGCTGGCATCGATTCTCCCGCGTGGTGCCTGCGACTGTGAGTTCAACGG
TTATCGGCATGACGCTTATCGCTATCGGTGAGGGCATAGTGCTAGGGATTGCTTACTGGATTGCCGGTGTGCCTTCGGCC
GTGGCCTTTGGGGTGTTGACCGCGTTTATGGCCTTAGTGCCTGGCGGCGCGCCAACCATGTTCACCTTGATCTCACTGTA
CTTAGTCGGTACCGGCGATATGACGGCGGGGGTGGGCTTATTCCTCTGGGGCAGTATCGAGCTGTTTATTGTCGATAAAA
CGCTGCGACCTAATTTGGTTGGCGGGCCAATCAAATTACCCTTCTTGCCGACCTTTTTCGGTTTGATTGGTGGGGTCAAA
ACCATGGGGTTCGTTGGTCTGTTTGTCGGCCCTGTGCTGATGGCGCTATTAATTGCCATTTGGCGCGAATGGTTAAGGGA
CGATCCCAGTACCGAGTCTGACTCGCCAGAGGCTCCGACATCAGCATCCCAAGAGATACAGCCAAAGCACGCAGATTAG

Upstream 100 bases:

>100_bases
AACTGGCTCACAGAATGGGGAACACCCAAAGGCTGGTTGTTGCTTGGCACTCTGCCAAGTTTTCCGCCTTGTTGTTGGAT
TCTATTGTGGGAGTATGTGG

Downstream 100 bases:

>100_bases
ATCTGGCCGTATGTCTGTTTGCGCTCTTCGGTGTAAAACCACCAAGGTTTAGGGTCGTCACCTGCCATAAAGCGGGTGAT
AGACAGAAACACATCCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MAQIISNAAVGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLMVKCGGRSALSATIALVLIILGLITPLIFV
FSYALQEIRAWVEWLVYANQHGAPVPLWIKDLPWIGEWLTLQWQQFIGEPHELGKIVSAISGQNLSGISRWVLQLGWNTL
GLLLTLLFMLITLFFLYKDGESVAKQLDIVGERILPARWHRFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSA
VAFGVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGGPIKLPFLPTFFGLIGGVK
TMGFVGLFVGPVLMALLIAIWREWLRDDPSTESDSPEAPTSASQEIQPKHAD

Sequences:

>Translated_372_residues
MAQIISNAAVGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLMVKCGGRSALSATIALVLIILGLITPLIFV
FSYALQEIRAWVEWLVYANQHGAPVPLWIKDLPWIGEWLTLQWQQFIGEPHELGKIVSAISGQNLSGISRWVLQLGWNTL
GLLLTLLFMLITLFFLYKDGESVAKQLDIVGERILPARWHRFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSA
VAFGVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGGPIKLPFLPTFFGLIGGVK
TMGFVGLFVGPVLMALLIAIWREWLRDDPSTESDSPEAPTSASQEIQPKHAD
>Mature_371_residues
AQIISNAAVGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLMVKCGGRSALSATIALVLIILGLITPLIFVF
SYALQEIRAWVEWLVYANQHGAPVPLWIKDLPWIGEWLTLQWQQFIGEPHELGKIVSAISGQNLSGISRWVLQLGWNTLG
LLLTLLFMLITLFFLYKDGESVAKQLDIVGERILPARWHRFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAV
AFGVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGGPIKLPFLPTFFGLIGGVKT
MGFVGLFVGPVLMALLIAIWREWLRDDPSTESDSPEAPTSASQEIQPKHAD

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=318, Percent_Identity=23.2704402515723, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40495; Mature: 40364

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQIISNAAVGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLMVKCGGRSAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHH
SATIALVLIILGLITPLIFVFSYALQEIRAWVEWLVYANQHGAPVPLWIKDLPWIGEWLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHH
LQWQQFIGEPHELGKIVSAISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDG
HHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCH
ESVAKQLDIVGERILPARWHRFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHH
VAFGVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCCCCCC
GGPIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLIAIWREWLRDDPSTESDSPEAPT
CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SASQEIQPKHAD
CCCCCCCCCCCC
>Mature Secondary Structure 
AQIISNAAVGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLMVKCGGRSAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHH
SATIALVLIILGLITPLIFVFSYALQEIRAWVEWLVYANQHGAPVPLWIKDLPWIGEWLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHH
LQWQQFIGEPHELGKIVSAISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDG
HHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCH
ESVAKQLDIVGERILPARWHRFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHH
VAFGVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCCCCCC
GGPIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLIAIWREWLRDDPSTESDSPEAPT
CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SASQEIQPKHAD
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]