Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

Click here to switch to the map view.

The map label for this gene is 113968798

Identifier: 113968798

GI number: 113968798

Start: 517717

End: 517980

Strand: Direct

Name: 113968798

Synonym: Shewmr4_0454

Alternate gene names: NA

Gene position: 517717-517980 (Clockwise)

Preceding gene: 113968795

Following gene: 113968799

Centisome position: 11.0

GC content: 33.71

Gene sequence:

>264_bases
GTGCTAATGATGCCAATGGTCATGGATGTTAAAGTGTTAACTGCTGTTTTTAAGATTAAATTCAGCCTTTATCACTTGGT
GAAAATTCAAAGTTTGACCTATATCACAGTTTTAAACATTTATTCAGTTACAGCTTTCACAAACTTCTGCGGTATTTTTG
TGCGTTTGAAAATTTTGCACATAACTTTAGATCAAAAACAGGTGATTTTTATCTCGAAAATGGCTTTTTTGCGCCTTTTG
TCTGCAGTATTTGTGGTTGCCTAG

Upstream 100 bases:

>100_bases
TTAGATAAGGTAGACTCGAACTCAGAGGGAAAAATAACTTGTTGTTTAAATGTGACAAAAATGCTTAAGGTGCGGCTGTT
GCTGGTAAGAGTGATATTGA

Downstream 100 bases:

>100_bases
TGGCAAAAGTACAAAATAAACTGCTTTGCCAAGTGTGACCTATGCCCTAAATTTGCCTAAAAAAATAATGGTATGAAGGT
TGTCACCATGTCGTCTTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MLMMPMVMDVKVLTAVFKIKFSLYHLVKIQSLTYITVLNIYSVTAFTNFCGIFVRLKILHITLDQKQVIFISKMAFLRLL
SAVFVVA

Sequences:

>Translated_87_residues
MLMMPMVMDVKVLTAVFKIKFSLYHLVKIQSLTYITVLNIYSVTAFTNFCGIFVRLKILHITLDQKQVIFISKMAFLRLL
SAVFVVA
>Mature_87_residues
MLMMPMVMDVKVLTAVFKIKFSLYHLVKIQSLTYITVLNIYSVTAFTNFCGIFVRLKILHITLDQKQVIFISKMAFLRLL
SAVFVVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10020; Mature: 10020

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMMPMVMDVKVLTAVFKIKFSLYHLVKIQSLTYITVLNIYSVTAFTNFCGIFVRLKILH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
ITLDQKQVIFISKMAFLRLLSAVFVVA
EEECCCEEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLMMPMVMDVKVLTAVFKIKFSLYHLVKIQSLTYITVLNIYSVTAFTNFCGIFVRLKILH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
ITLDQKQVIFISKMAFLRLLSAVFVVA
EEECCCEEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA