Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

Click here to switch to the map view.

The map label for this gene is 113968794

Identifier: 113968794

GI number: 113968794

Start: 513024

End: 513314

Strand: Direct

Name: 113968794

Synonym: Shewmr4_0450

Alternate gene names: NA

Gene position: 513024-513314 (Clockwise)

Preceding gene: 113968793

Following gene: 113968795

Centisome position: 10.9

GC content: 43.64

Gene sequence:

>291_bases
ATGACGCGTTTAGCAGAAAAGGACAAGTTACAACCCGACTGGTGGACTAAGTCACTGGCAGGGTTAGTGTTAGGTTTTAC
TTTAGCCCTAGGGCTAGTGGGATTATTTGCCTGGTTTGGTCCGGGCGGAATCGATGCCGACACTAAGGTGCAGGTCAATA
TGTGGTTGATCGCACCCATTTGGTTATCTGTCTTAAGTTTGAGTTTTCTCTTTAAAACAGGACTCAGGGCCATTGGCTAT
TTAGGCCTGTTTAACGTTTTGACTTATATAGTTTTATATACCTTTAGGTGA

Upstream 100 bases:

>100_bases
TCTGTTCACCTTCAGTGCCGCAATGTTTCTCTGGATAGCCCTGTTGATGTTGCTCTCGGGCTTAGTGCCTTTTATCTCTC
TTATCGGTCGGAAATAAGCC

Downstream 100 bases:

>100_bases
TAAGGGATGAAAGTTCGCAGTGATGTGTTAAGGGTGTATCAGTCTATCCATATTTGGACTGGGATCATCGCCGGAATAGT
GTTGTTTATCGGTTTCTATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MTRLAEKDKLQPDWWTKSLAGLVLGFTLALGLVGLFAWFGPGGIDADTKVQVNMWLIAPIWLSVLSLSFLFKTGLRAIGY
LGLFNVLTYIVLYTFR

Sequences:

>Translated_96_residues
MTRLAEKDKLQPDWWTKSLAGLVLGFTLALGLVGLFAWFGPGGIDADTKVQVNMWLIAPIWLSVLSLSFLFKTGLRAIGY
LGLFNVLTYIVLYTFR
>Mature_95_residues
TRLAEKDKLQPDWWTKSLAGLVLGFTLALGLVGLFAWFGPGGIDADTKVQVNMWLIAPIWLSVLSLSFLFKTGLRAIGYL
GLFNVLTYIVLYTFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10740; Mature: 10609

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLAEKDKLQPDWWTKSLAGLVLGFTLALGLVGLFAWFGPGGIDADTKVQVNMWLIAPI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHH
WLSVLSLSFLFKTGLRAIGYLGLFNVLTYIVLYTFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TRLAEKDKLQPDWWTKSLAGLVLGFTLALGLVGLFAWFGPGGIDADTKVQVNMWLIAPI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHH
WLSVLSLSFLFKTGLRAIGYLGLFNVLTYIVLYTFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA