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The map label for this gene is yraQ [C]

Identifier: 113968791

GI number: 113968791

Start: 509941

End: 511431

Strand: Direct

Name: yraQ [C]

Synonym: Shewmr4_0447

Alternate gene names: 113968791

Gene position: 509941-511431 (Clockwise)

Preceding gene: 113968790

Following gene: 113968793

Centisome position: 10.84

GC content: 54.26

Gene sequence:

>1491_bases
ATGTTATTGAAGAATTTTATCGATCTGTTTTTAGATTCCGCCCCTTGGCTGTTGCTCGGCTTGATTCTGGCGGGCCTACT
CAAAGTGTTTGTGCCCATGGCTTGGATGCAAAAGCAGCTCGGCGGGCATGGCTTTAAAACCGTGGTGAAGGCGGCGTTAT
TGGGCGCGCCATTACCTCTGTGTTCCTGCGGGGTGATCCCCGCGGCCGTTGGGCTGCGCCGCTCTGGGGCATCTAAAGCG
GCAACCACCTCCTTTTTAGTTTCCACCCCTGAAACTGGGGTCGACTCTGTAACGGTTTCTTACGTTTTGCTCGGCCCTTT
TATGGCGATAGTACGGCCGATTGCGGCGATCACTAGTGCTATTGTTGCGGGCCTTTTAGTGGGGCGAGATGATGACGATG
GCAAACCTGCTGCTAAGGCCGAGGCCCTGTTAGACAAGGCTCAGTCAGACAAGGCATTCGCTAGCACTGCGCCTGTCGCT
TCATGTTGTGCTTCAAAATCCCCGTCGGCAGAGAAAGTGCTCAAAGCCGAAGCGGTAAAAAGCTGCTGCGCATCGACTAA
GGCGCCCGCAATCACGCCAGTTAAATCTTCCTGCTGCGGCAGTGATAACGCGAAAGCGCCAGCAACCGAGCCGAAAATCA
AAATGACGCCGATGGCTACGCCAAGTCTAATGGCTGCTGGCGGCCCAAGTATGGGCACTGTCGGTATGGTTAATGCGGCT
AAAGTCAGTGCGGTCAAGGTTGAAAATGCAGGTTCATGCTGTGGTACTCAAACCGCTGCGCCTGAAAAAATAGTCGTAGT
GAAGAAGGGCGCTTGTTGTGGTAGCTCAAGCGCGAAAACGGCAGATAGCCATCAAGCCGAAGGCGAGAGCTGCTGCGCAT
CTACACAGGATATGGCGACCGAGCTTAAGTCTGAATCTGTGATTGCACGAGTAGGCATAGGTCTTAAATATGCGGCGACG
GATCTGGTGCGTGACACTACACTCTGGTTGCTGGTGGGCTTATTCTTCGCAGCCATAGTGCAAACCTATGTTCCAGCAGA
CTTTTTAGCTAAGTGGGGCGATGGATTGCTGGCCATGCTGGTAATGGTGCTAGTGTCTGTGCCTATGTATATCTGCGCCA
CGGCTTCGACGCCGATTGCCGCCGGCTTGCTACTGGCGGGTGTCTCCCCTGGTGCCGTGCTGGTATTTATGATGGCAGGT
CCTGCAACCAATATCGCGACTTTAGGCGTGGTGACTAAGGAGCTGGGTAAGCGCGCGCTCTATGGCTATCTTGGGGGCGT
CTTGGGGGTTGCCTTAGTCGCTGGCGCTTTGGTGAATTATCTGGTCGCCACCTTTGGTTTTGAGGTGATGCCACAGATTG
GTGAGCAGCACCAGATGTTACCCGAGTGGTTAGTTGCGACCTCAGGCATAGTGCTCGCATTGCTGATGGCGAAAGTGGTA
TTCGAGAAAATCCCCCGTAGTTGGCTGCGCCGTAGCGACTGCTGCTCATAG

Upstream 100 bases:

>100_bases
TTTTAGAAGCGCTGGAGTCGAGTACAGAGCGAGTGCGTGTGGAGCACGACCACGGCCAAACTCCAGATGCGACAACCCTA
GATAAGTCAGGGAATTAACT

Downstream 100 bases:

>100_bases
TGCTAACGCTAACTAAAAATCCCCAGCAATGACTGGGGATTTTTTATTATGACACTTTAATGGTGCTGCTCACGCGGCAG
AGCGACGCGTGATGCTCAGT

Product: permease

Products: NA

Alternate protein names: Permease Family

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MLLKNFIDLFLDSAPWLLLGLILAGLLKVFVPMAWMQKQLGGHGFKTVVKAALLGAPLPLCSCGVIPAAVGLRRSGASKA
ATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAITSAIVAGLLVGRDDDDGKPAAKAEALLDKAQSDKAFASTAPVA
SCCASKSPSAEKVLKAEAVKSCCASTKAPAITPVKSSCCGSDNAKAPATEPKIKMTPMATPSLMAAGGPSMGTVGMVNAA
KVSAVKVENAGSCCGTQTAAPEKIVVVKKGACCGSSSAKTADSHQAEGESCCASTQDMATELKSESVIARVGIGLKYAAT
DLVRDTTLWLLVGLFFAAIVQTYVPADFLAKWGDGLLAMLVMVLVSVPMYICATASTPIAAGLLLAGVSPGAVLVFMMAG
PATNIATLGVVTKELGKRALYGYLGGVLGVALVAGALVNYLVATFGFEVMPQIGEQHQMLPEWLVATSGIVLALLMAKVV
FEKIPRSWLRRSDCCS

Sequences:

>Translated_496_residues
MLLKNFIDLFLDSAPWLLLGLILAGLLKVFVPMAWMQKQLGGHGFKTVVKAALLGAPLPLCSCGVIPAAVGLRRSGASKA
ATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAITSAIVAGLLVGRDDDDGKPAAKAEALLDKAQSDKAFASTAPVA
SCCASKSPSAEKVLKAEAVKSCCASTKAPAITPVKSSCCGSDNAKAPATEPKIKMTPMATPSLMAAGGPSMGTVGMVNAA
KVSAVKVENAGSCCGTQTAAPEKIVVVKKGACCGSSSAKTADSHQAEGESCCASTQDMATELKSESVIARVGIGLKYAAT
DLVRDTTLWLLVGLFFAAIVQTYVPADFLAKWGDGLLAMLVMVLVSVPMYICATASTPIAAGLLLAGVSPGAVLVFMMAG
PATNIATLGVVTKELGKRALYGYLGGVLGVALVAGALVNYLVATFGFEVMPQIGEQHQMLPEWLVATSGIVLALLMAKVV
FEKIPRSWLRRSDCCS
>Mature_496_residues
MLLKNFIDLFLDSAPWLLLGLILAGLLKVFVPMAWMQKQLGGHGFKTVVKAALLGAPLPLCSCGVIPAAVGLRRSGASKA
ATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAITSAIVAGLLVGRDDDDGKPAAKAEALLDKAQSDKAFASTAPVA
SCCASKSPSAEKVLKAEAVKSCCASTKAPAITPVKSSCCGSDNAKAPATEPKIKMTPMATPSLMAAGGPSMGTVGMVNAA
KVSAVKVENAGSCCGTQTAAPEKIVVVKKGACCGSSSAKTADSHQAEGESCCASTQDMATELKSESVIARVGIGLKYAAT
DLVRDTTLWLLVGLFFAAIVQTYVPADFLAKWGDGLLAMLVMVLVSVPMYICATASTPIAAGLLLAGVSPGAVLVFMMAG
PATNIATLGVVTKELGKRALYGYLGGVLGVALVAGALVNYLVATFGFEVMPQIGEQHQMLPEWLVATSGIVLALLMAKVV
FEKIPRSWLRRSDCCS

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50895; Mature: 50895

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKNFIDLFLDSAPWLLLGLILAGLLKVFVPMAWMQKQLGGHGFKTVVKAALLGAPLPL
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCH
CSCGVIPAAVGLRRSGASKAATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAITSA
HHCCHHHHHHHHHCCCCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IVAGLLVGRDDDDGKPAAKAEALLDKAQSDKAFASTAPVASCCASKSPSAEKVLKAEAVK
HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHCCCCCCHHHHHHHHHHH
SCCASTKAPAITPVKSSCCGSDNAKAPATEPKIKMTPMATPSLMAAGGPSMGTVGMVNAA
HHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEECCCCCCHHHHCCCCCCCCCCCCCHH
KVSAVKVENAGSCCGTQTAAPEKIVVVKKGACCGSSSAKTADSHQAEGESCCASTQDMAT
HEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCHHHHCCHHHHHH
ELKSESVIARVGIGLKYAATDLVRDTTLWLLVGLFFAAIVQTYVPADFLAKWGDGLLAML
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHH
VMVLVSVPMYICATASTPIAAGLLLAGVSPGAVLVFMMAGPATNIATLGVVTKELGKRAL
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH
YGYLGGVLGVALVAGALVNYLVATFGFEVMPQIGEQHQMLPEWLVATSGIVLALLMAKVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
FEKIPRSWLRRSDCCS
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLLKNFIDLFLDSAPWLLLGLILAGLLKVFVPMAWMQKQLGGHGFKTVVKAALLGAPLPL
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCH
CSCGVIPAAVGLRRSGASKAATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAITSA
HHCCHHHHHHHHHCCCCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IVAGLLVGRDDDDGKPAAKAEALLDKAQSDKAFASTAPVASCCASKSPSAEKVLKAEAVK
HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHCCCCCCHHHHHHHHHHH
SCCASTKAPAITPVKSSCCGSDNAKAPATEPKIKMTPMATPSLMAAGGPSMGTVGMVNAA
HHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEECCCCCCHHHHCCCCCCCCCCCCCHH
KVSAVKVENAGSCCGTQTAAPEKIVVVKKGACCGSSSAKTADSHQAEGESCCASTQDMAT
HEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCHHHHCCHHHHHH
ELKSESVIARVGIGLKYAATDLVRDTTLWLLVGLFFAAIVQTYVPADFLAKWGDGLLAML
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHH
VMVLVSVPMYICATASTPIAAGLLLAGVSPGAVLVFMMAGPATNIATLGVVTKELGKRAL
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH
YGYLGGVLGVALVAGALVNYLVATFGFEVMPQIGEQHQMLPEWLVATSGIVLALLMAKVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
FEKIPRSWLRRSDCCS
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA