| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is ilvG [H]
Identifier: 113968706
GI number: 113968706
Start: 387107
End: 388780
Strand: Direct
Name: ilvG [H]
Synonym: Shewmr4_0362
Alternate gene names: 113968706
Gene position: 387107-388780 (Clockwise)
Preceding gene: 113968705
Following gene: 113968707
Centisome position: 8.23
GC content: 52.63
Gene sequence:
>1674_bases ATGGAACCAGGGCAGATGATTAGAGGCGCAGACGCAGTCATAAAAGTGTTGGCAGCACATGGTGTTACCACAGTATTTGG TTACCCAGGTGGTGCCATTATGCCAATCTACGATGCCCTCTATGGAAGCCCTGTCGAACATCTCTTAAGCCGCCACGAAC AAGGTGCAGCCTTTGCCGCCGTTGGTTACGCCAGAGCCAGTGGTAAAACCGGCGTATGCTTTGCCACCTCAGGCCCTGGT GCCACCAACTTAATCACTTCGCTTGCCGATGCGTTATTAGATTCTGTGCCTGTTGTCGCTATCACGGGTCAGGTTTCAAC CGCTGTGATTGGCACTGATGCGTTTCAAGAAATCGATGTATTGGGCATGTCCTTAAGCTGCACTAAGCACAGCTTTATGG TGACGGATGTAAACGATCTTATCCCGACCTTGTATCAAGCCTTCGAAATCGCGGCATCGGGTCGCCCTGGCCCAGTGCTG GTGGATATCCCTAAAGATATCCAAATCGCGCAACTGGAATATCGCACTCCCTTGCTGGCGGTAACCAATGAACCACAGGC GAGCGTCAGCGAGATTGACGCGGCCCGCGCCCTGTTAGCAGAGGCGAAGCAGCCTATGTTGTACGTGGGTGGTGGCGTCG GGATGGCGGGCGCGGTCGATCAACTGCGGGAATTTATCAAAGCCACGGGTATGCCATCGGTTGCGACGTTAAAGGGCTTA GGCAGTATTGCCCATGGCACTCCAGGTTATTTAGGCATGTTAGGTATGCATGGCGGAAAGGCGGCCAATCTAGCGGTGCA GGATTGTGATTTATTAGTGGTTGCCGGTGCGCGCTTTGATGACAGGGTCACAGGGCGTTTAGCGACTTTTGCCAACAAGG CTAAAGTCATCCATTTAGATATAGACGCCGCCGAGTTAGGCAAATTGCGCCAGCCCGATGTGGCCATTGCCGGTGATTTA CGCCAGATTTTCCCTGCTTTAGCTATGGCGCTGAACATCACGCCTTGGCAAGCAGAGGTTGAACATCTTGCCCGTAAACA TCAATGGGATTATCAACATCCCGGCAGCTTAATCTACGCTCCTGCCATGCTGCGCCGCCTTGCTAATAAACTGCCCGAAG ACAGCGTAGTGAGCTGCGATGTGGGCCAACATCAAATGTGGGTCGCCCAGCATATGTGGTTCCGTCGCCCTGAAGATCAT TTATCCAGCGCAGGTTTAGGCACTATGGGCTTTGGTTTACCCGCCGCTATCGGCGCCCAAGTCGCCCGCCCCGATGCAAC TGTAGTCACAGTGTCTGGTGATGGCTCTTTTATGATGAACGTGCAGGAGCTGACCACCATCAAGCGCCGCAAATTACCGG TGAAGATCCTACTAATCGACAACCAAAAATTGGGGATGGTGAAACAGTGGCAACAGCTATTCTTTGAAGAGCGCTACAGC GAAACCGATCTGTCAGACAACCCCGATTTTGTGCAACTCGCTTCGGCCTTCGATATTCCCGGCCGCACGATTTTCTCTTC CGACGAAGTGGAAGAGGCCTTAACCGAAATGTTAGCGGCTAAGGGTCCCTATTTGTTACACGTAGCAATCGACGATGCTT TTAACGTTTGGCCACTGGTGCCCCCCGGCGCATCAAACAGCGATATGATGGACGAAATGGAGAAACAAACATGA
Upstream 100 bases:
>100_bases TCTTCGTTTTCAGGCCCTAGGTTTTGGAAATGAGGTTTCGAAATAGCACAAATTACGAGTCGATTTTCGGCAATTCAGGA TCAAGGTAGCGAGAGAGAAT
Downstream 100 bases:
>100_bases TCCACTCCCTAGAATTAACGGTTCAACAACGCCCAGAAGTGATAGAACGTGTACTACGTGTGACTCGTCACCGTGGTTTT ACTGTCACCCAAATGCAAAT
Product: acetolactate synthase 2 catalytic subunit
Products: NA
Alternate protein names: AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit [H]
Number of amino acids: Translated: 557; Mature: 557
Protein sequence:
>557_residues MEPGQMIRGADAVIKVLAAHGVTTVFGYPGGAIMPIYDALYGSPVEHLLSRHEQGAAFAAVGYARASGKTGVCFATSGPG ATNLITSLADALLDSVPVVAITGQVSTAVIGTDAFQEIDVLGMSLSCTKHSFMVTDVNDLIPTLYQAFEIAASGRPGPVL VDIPKDIQIAQLEYRTPLLAVTNEPQASVSEIDAARALLAEAKQPMLYVGGGVGMAGAVDQLREFIKATGMPSVATLKGL GSIAHGTPGYLGMLGMHGGKAANLAVQDCDLLVVAGARFDDRVTGRLATFANKAKVIHLDIDAAELGKLRQPDVAIAGDL RQIFPALAMALNITPWQAEVEHLARKHQWDYQHPGSLIYAPAMLRRLANKLPEDSVVSCDVGQHQMWVAQHMWFRRPEDH LSSAGLGTMGFGLPAAIGAQVARPDATVVTVSGDGSFMMNVQELTTIKRRKLPVKILLIDNQKLGMVKQWQQLFFEERYS ETDLSDNPDFVQLASAFDIPGRTIFSSDEVEEALTEMLAAKGPYLLHVAIDDAFNVWPLVPPGASNSDMMDEMEKQT
Sequences:
>Translated_557_residues MEPGQMIRGADAVIKVLAAHGVTTVFGYPGGAIMPIYDALYGSPVEHLLSRHEQGAAFAAVGYARASGKTGVCFATSGPG ATNLITSLADALLDSVPVVAITGQVSTAVIGTDAFQEIDVLGMSLSCTKHSFMVTDVNDLIPTLYQAFEIAASGRPGPVL VDIPKDIQIAQLEYRTPLLAVTNEPQASVSEIDAARALLAEAKQPMLYVGGGVGMAGAVDQLREFIKATGMPSVATLKGL GSIAHGTPGYLGMLGMHGGKAANLAVQDCDLLVVAGARFDDRVTGRLATFANKAKVIHLDIDAAELGKLRQPDVAIAGDL RQIFPALAMALNITPWQAEVEHLARKHQWDYQHPGSLIYAPAMLRRLANKLPEDSVVSCDVGQHQMWVAQHMWFRRPEDH LSSAGLGTMGFGLPAAIGAQVARPDATVVTVSGDGSFMMNVQELTTIKRRKLPVKILLIDNQKLGMVKQWQQLFFEERYS ETDLSDNPDFVQLASAFDIPGRTIFSSDEVEEALTEMLAAKGPYLLHVAIDDAFNVWPLVPPGASNSDMMDEMEKQT >Mature_557_residues MEPGQMIRGADAVIKVLAAHGVTTVFGYPGGAIMPIYDALYGSPVEHLLSRHEQGAAFAAVGYARASGKTGVCFATSGPG ATNLITSLADALLDSVPVVAITGQVSTAVIGTDAFQEIDVLGMSLSCTKHSFMVTDVNDLIPTLYQAFEIAASGRPGPVL VDIPKDIQIAQLEYRTPLLAVTNEPQASVSEIDAARALLAEAKQPMLYVGGGVGMAGAVDQLREFIKATGMPSVATLKGL GSIAHGTPGYLGMLGMHGGKAANLAVQDCDLLVVAGARFDDRVTGRLATFANKAKVIHLDIDAAELGKLRQPDVAIAGDL RQIFPALAMALNITPWQAEVEHLARKHQWDYQHPGSLIYAPAMLRRLANKLPEDSVVSCDVGQHQMWVAQHMWFRRPEDH LSSAGLGTMGFGLPAAIGAQVARPDATVVTVSGDGSFMMNVQELTTIKRRKLPVKILLIDNQKLGMVKQWQQLFFEERYS ETDLSDNPDFVQLASAFDIPGRTIFSSDEVEEALTEMLAAKGPYLLHVAIDDAFNVWPLVPPGASNSDMMDEMEKQT
Specific function: Catalyzes the first step in the biosynthesis of branched-chain amino acids [H]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI21361361, Length=518, Percent_Identity=28.5714285714286, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI93004078, Length=557, Percent_Identity=25.3141831238779, Blast_Score=156, Evalue=6e-38, Organism=Escherichia coli, GI1790104, Length=551, Percent_Identity=44.6460980036298, Blast_Score=466, Evalue=1e-132, Organism=Escherichia coli, GI87081685, Length=569, Percent_Identity=41.6520210896309, Blast_Score=421, Evalue=1e-119, Organism=Escherichia coli, GI1786717, Length=562, Percent_Identity=30.2491103202847, Blast_Score=254, Evalue=1e-68, Organism=Escherichia coli, GI1787096, Length=538, Percent_Identity=29.182156133829, Blast_Score=181, Evalue=2e-46, Organism=Escherichia coli, GI1788716, Length=553, Percent_Identity=26.0397830018083, Blast_Score=154, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17542570, Length=525, Percent_Identity=28.7619047619048, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17531299, Length=560, Percent_Identity=26.4285714285714, Blast_Score=142, Evalue=5e-34, Organism=Caenorhabditis elegans, GI17531301, Length=560, Percent_Identity=26.4285714285714, Blast_Score=142, Evalue=5e-34, Organism=Saccharomyces cerevisiae, GI6323755, Length=590, Percent_Identity=42.3728813559322, Blast_Score=454, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6320816, Length=544, Percent_Identity=22.2426470588235, Blast_Score=91, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6323073, Length=476, Percent_Identity=24.7899159663866, Blast_Score=86, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6321524, Length=470, Percent_Identity=24.0425531914894, Blast_Score=81, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6323163, Length=481, Percent_Identity=22.8690228690229, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI19922626, Length=502, Percent_Identity=28.0876494023904, Blast_Score=154, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 59613; Mature: 59613
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPGQMIRGADAVIKVLAAHGVTTVFGYPGGAIMPIYDALYGSPVEHLLSRHEQGAAFAA CCCCHHHCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHCCCCCCEEEE VGYARASGKTGVCFATSGPGATNLITSLADALLDSVPVVAITGQVSTAVIGTDAFQEIDV EEHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCHHHHHHHH LGMSLSCTKHSFMVTDVNDLIPTLYQAFEIAASGRPGPVLVDIPKDIQIAQLEYRTPLLA HCCEEECCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCEEE VTNEPQASVSEIDAARALLAEAKQPMLYVGGGVGMAGAVDQLREFIKATGMPSVATLKGL ECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHC GSIAHGTPGYLGMLGMHGGKAANLAVQDCDLLVVAGARFDDRVTGRLATFANKAKVIHLD CHHCCCCCCHHEEEECCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEE IDAAELGKLRQPDVAIAGDLRQIFPALAMALNITPWQAEVEHLARKHQWDYQHPGSLIYA CCHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEH PAMLRRLANKLPEDSVVSCDVGQHQMWVAQHMWFRRPEDHLSSAGLGTMGFGLPAAIGAQ HHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHCCH VARPDATVVTVSGDGSFMMNVQELTTIKRRKLPVKILLIDNQKLGMVKQWQQLFFEERYS HCCCCCEEEEEECCCCEEEEHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCC ETDLSDNPDFVQLASAFDIPGRTIFSSDEVEEALTEMLAAKGPYLLHVAIDDAFNVWPLV CCCCCCCCCCEEHHHHCCCCCCEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC PPGASNSDMMDEMEKQT CCCCCCHHHHHHHHHCC >Mature Secondary Structure MEPGQMIRGADAVIKVLAAHGVTTVFGYPGGAIMPIYDALYGSPVEHLLSRHEQGAAFAA CCCCHHHCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHCCCCCCEEEE VGYARASGKTGVCFATSGPGATNLITSLADALLDSVPVVAITGQVSTAVIGTDAFQEIDV EEHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCHHHHHHHH LGMSLSCTKHSFMVTDVNDLIPTLYQAFEIAASGRPGPVLVDIPKDIQIAQLEYRTPLLA HCCEEECCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCEEE VTNEPQASVSEIDAARALLAEAKQPMLYVGGGVGMAGAVDQLREFIKATGMPSVATLKGL ECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHC GSIAHGTPGYLGMLGMHGGKAANLAVQDCDLLVVAGARFDDRVTGRLATFANKAKVIHLD CHHCCCCCCHHEEEECCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEE IDAAELGKLRQPDVAIAGDLRQIFPALAMALNITPWQAEVEHLARKHQWDYQHPGSLIYA CCHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEH PAMLRRLANKLPEDSVVSCDVGQHQMWVAQHMWFRRPEDHLSSAGLGTMGFGLPAAIGAQ HHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHCCH VARPDATVVTVSGDGSFMMNVQELTTIKRRKLPVKILLIDNQKLGMVKQWQQLFFEERYS HCCCCCEEEEEECCCCEEEEHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCC ETDLSDNPDFVQLASAFDIPGRTIFSSDEVEEALTEMLAAKGPYLLHVAIDDAFNVWPLV CCCCCCCCCCEEHHHHCCCCCCEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC PPGASNSDMMDEMEKQT CCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3550695; 1379743; 9278503; 1995430; 6154938; 7015336; 3897211 [H]