| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is modB [H]
Identifier: 113968622
GI number: 113968622
Start: 298120
End: 298800
Strand: Direct
Name: modB [H]
Synonym: Shewmr4_0278
Alternate gene names: 113968622
Gene position: 298120-298800 (Clockwise)
Preceding gene: 113968621
Following gene: 113968623
Centisome position: 6.33
GC content: 52.86
Gene sequence:
>681_bases ATGGATTGGCAGGCACTCTGGTTATCGGTCAAGCTCAGTAGCATCACGGTATTGGTGCTGATCCCGCTGGCGATTCTGGC GGGCCGAGCCTTAGCCTACCGTCAGTTTGTGGGTAAGTCCTGGGTTGAAGCCTTAATCATGGTGCCCTTAGTCTTACCGC CGACTGTGATCGGGTATTACTTGCTGGTGGGGCTAGGGAGTCAAAGCTGGTTAGGGCAATGGTTAGAGCGTCTAACTGGG CAGCAGTTAGTGTTTCATTTCTCGGGGTTAGTGCTGGCGTCCGTGCTGGTGAATATTCCCTTTGCGCTGCAACCGATACA ACGCGCCTTTGAAGCTGTTCCTCATGATGTGCGCGATGCTGCAGCCTGTTGCGGCATGAGCAAACTTAAGATTCTGCTGA AAATTGAATTGCCTATGGTGTGGCCTGGGGTGCTGACCGCCTTAGTGCTGTGCTTCTCCCATGTACTCGGTGAGTTTGGG GTCGTGTTGATGATGGGCGGGAATATTGCCGGCGAGACCAAGACTATCTCGATTTCCATCTACGACAGTGTTCAGGCCTT TGATTTTGGTGCTGCAGGAACTATGTCTCTGGTATTGCTGTTATTCGCGATTACCGCATTGGCGCTCACCACCAGTTTAT CGCGGCGTTTAGGAGGTCAGCGTGGCGCAAATCATCGCTGA
Upstream 100 bases:
>100_bases GAGCAACCGCAGAGCGTTTTTATCAATATCTTCAATCTGATGCCGCCAGAGCCGTATTCCTGCAATACGGATTTGGTCTA CCCGCTCAGTAAGGCCTTAA
Downstream 100 bases:
>100_bases TCTGCACTGCCAGATCCAAAACCATAAACACATAAAACTGAGCGCCGAATTTAGCTGCAAGGCGGGTGAGGTGCTGGCTG TCGTCGGGCCTTCTGGCGGC
Product: molybdate ABC transporter inner membrane subunit
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MDWQALWLSVKLSSITVLVLIPLAILAGRALAYRQFVGKSWVEALIMVPLVLPPTVIGYYLLVGLGSQSWLGQWLERLTG QQLVFHFSGLVLASVLVNIPFALQPIQRAFEAVPHDVRDAAACCGMSKLKILLKIELPMVWPGVLTALVLCFSHVLGEFG VVLMMGGNIAGETKTISISIYDSVQAFDFGAAGTMSLVLLLFAITALALTTSLSRRLGGQRGANHR
Sequences:
>Translated_226_residues MDWQALWLSVKLSSITVLVLIPLAILAGRALAYRQFVGKSWVEALIMVPLVLPPTVIGYYLLVGLGSQSWLGQWLERLTG QQLVFHFSGLVLASVLVNIPFALQPIQRAFEAVPHDVRDAAACCGMSKLKILLKIELPMVWPGVLTALVLCFSHVLGEFG VVLMMGGNIAGETKTISISIYDSVQAFDFGAAGTMSLVLLLFAITALALTTSLSRRLGGQRGANHR >Mature_226_residues MDWQALWLSVKLSSITVLVLIPLAILAGRALAYRQFVGKSWVEALIMVPLVLPPTVIGYYLLVGLGSQSWLGQWLERLTG QQLVFHFSGLVLASVLVNIPFALQPIQRAFEAVPHDVRDAAACCGMSKLKILLKIELPMVWPGVLTALVLCFSHVLGEFG VVLMMGGNIAGETKTISISIYDSVQAFDFGAAGTMSLVLLLFAITALALTTSLSRRLGGQRGANHR
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=224, Percent_Identity=33.9285714285714, Blast_Score=107, Evalue=6e-25, Organism=Escherichia coli, GI1788764, Length=193, Percent_Identity=29.5336787564767, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI87082099, Length=218, Percent_Identity=28.8990825688073, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1786254, Length=213, Percent_Identity=29.1079812206573, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24446; Mature: 24446
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWQALWLSVKLSSITVLVLIPLAILAGRALAYRQFVGKSWVEALIMVPLVLPPTVIGYY CCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LLVGLGSQSWLGQWLERLTGQQLVFHFSGLVLASVLVNIPFALQPIQRAFEAVPHDVRDA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH AACCGMSKLKILLKIELPMVWPGVLTALVLCFSHVLGEFGVVLMMGGNIAGETKTISISI HHHCCHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEEE YDSVQAFDFGAAGTMSLVLLLFAITALALTTSLSRRLGGQRGANHR ECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MDWQALWLSVKLSSITVLVLIPLAILAGRALAYRQFVGKSWVEALIMVPLVLPPTVIGYY CCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LLVGLGSQSWLGQWLERLTGQQLVFHFSGLVLASVLVNIPFALQPIQRAFEAVPHDVRDA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH AACCGMSKLKILLKIELPMVWPGVLTALVLCFSHVLGEFGVVLMMGGNIAGETKTISISI HHHCCHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEEE YDSVQAFDFGAAGTMSLVLLLFAITALALTTSLSRRLGGQRGANHR ECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8384683; 7665518 [H]