| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is murB [H]
Identifier: 113968526
GI number: 113968526
Start: 207421
End: 208476
Strand: Direct
Name: murB [H]
Synonym: Shewmr4_0181
Alternate gene names: 113968526
Gene position: 207421-208476 (Clockwise)
Preceding gene: 113968524
Following gene: 113968527
Centisome position: 4.41
GC content: 47.54
Gene sequence:
>1056_bases ATGTCGCTTTTGTCGCGGCAGAACATCACCATGTCTTTTCCATATTCGCTAAAGCCGTTTAATACTTTTGGCGTGGAGCA ATCTTGCTTATCCATGATTGAAGTCCATTCCAAGGCAGAGCTGCAATCGACCTGCTTATCCTTATATCAGTCTAAGCGAC CTATGCTTGTCCTCGGTGGCGGCAGCAATATCGTATTCACCGATGATTTTAATGGCACTGTAGTGCGTGTGTTGACTAAG GGTATTTCCTGCTCTGAAGATGGCACTCACTTTTACCTTGCCGTTGAGGCGGGTGAGAACTGGCATGAATTAGTTCACTT CAGCTTAAATCAGGACATGCCAGGTCTTGAGAACTTAGCGCTTATCCCTGGCACTGTTGGTGCTGCTCCGATCCAAAACA TCGGCGCCTATGGCGTAGAGCTGTGCGATATTTGTGATTGGGTCGAATATCTGGATCTCGAGTCTGGTAACTTGCTAAGG CTTACTGCAGATGAGTGTGAGTTTGCCTATCGGGAGTCAATATTTAAGGGCTGTTTACGCGACAAAGCTGTGATTACTGC CGTTGGTTTGCGCCTCCCTAAAGCTTGGCAACCAAAATTGGCCTATGGTCCGTTACAATCATTTAACGCCGAGACGGTGA CCCCAAGGGAGATTTTTGAACGAGTCTGCGAAGTGAGGAGCGAAAAGCTACCTAACCCAGAAGAACTCGGAAATGCAGGT AGTTTCTTTAAGAATCCTATCGTAAGCGCGGCGACTTATATGCAGCTTGCTGCGCATTTCCCGAGTATCGTCGGTTATGC GCAACCCAATGGAGAGGTTAAACTGGCTGCAGGTTGGCTAATCGAACATGCGGGTCTTAAGGGTTTTGCTCTTGGTAACG CGGGAGTGCATGCGAAGCAAGCCTTAGTATTAGTCAATTTAGGTCATGCGACCGGCCAAGATATTTGTCGATTAGCATTA CATGTTATTGCGCGAGTGAATGAGGTTTTTGGCGTTAAGCTAGAAGCCGAGCCAAGAATTATGGGATTAACAGGGGAGAC GAGTCTCGATGTCTGA
Upstream 100 bases:
>100_bases CTCTGTTGTTTTTACTCTTGTTCAAGACCTTACTGCATTAATTTACCTGCTTTTACCGATCTACCTCAGTTTGCTGCAAT TCTAGGGTGAAGCGTTTACA
Downstream 100 bases:
>100_bases TAACTGGGTGAGAAAACGCGAAATACTGGGATTACTGTCGAGCGAATATTTTGTCTCGGGTGAAGAGTTGGCGACACAAC TGGGTATTTCTCGTGCGGCG
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase [H]
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSLLSRQNITMSFPYSLKPFNTFGVEQSCLSMIEVHSKAELQSTCLSLYQSKRPMLVLGGGSNIVFTDDFNGTVVRVLTK GISCSEDGTHFYLAVEAGENWHELVHFSLNQDMPGLENLALIPGTVGAAPIQNIGAYGVELCDICDWVEYLDLESGNLLR LTADECEFAYRESIFKGCLRDKAVITAVGLRLPKAWQPKLAYGPLQSFNAETVTPREIFERVCEVRSEKLPNPEELGNAG SFFKNPIVSAATYMQLAAHFPSIVGYAQPNGEVKLAAGWLIEHAGLKGFALGNAGVHAKQALVLVNLGHATGQDICRLAL HVIARVNEVFGVKLEAEPRIMGLTGETSLDV
Sequences:
>Translated_351_residues MSLLSRQNITMSFPYSLKPFNTFGVEQSCLSMIEVHSKAELQSTCLSLYQSKRPMLVLGGGSNIVFTDDFNGTVVRVLTK GISCSEDGTHFYLAVEAGENWHELVHFSLNQDMPGLENLALIPGTVGAAPIQNIGAYGVELCDICDWVEYLDLESGNLLR LTADECEFAYRESIFKGCLRDKAVITAVGLRLPKAWQPKLAYGPLQSFNAETVTPREIFERVCEVRSEKLPNPEELGNAG SFFKNPIVSAATYMQLAAHFPSIVGYAQPNGEVKLAAGWLIEHAGLKGFALGNAGVHAKQALVLVNLGHATGQDICRLAL HVIARVNEVFGVKLEAEPRIMGLTGETSLDV >Mature_350_residues SLLSRQNITMSFPYSLKPFNTFGVEQSCLSMIEVHSKAELQSTCLSLYQSKRPMLVLGGGSNIVFTDDFNGTVVRVLTKG ISCSEDGTHFYLAVEAGENWHELVHFSLNQDMPGLENLALIPGTVGAAPIQNIGAYGVELCDICDWVEYLDLESGNLLRL TADECEFAYRESIFKGCLRDKAVITAVGLRLPKAWQPKLAYGPLQSFNAETVTPREIFERVCEVRSEKLPNPEELGNAGS FFKNPIVSAATYMQLAAHFPSIVGYAQPNGEVKLAAGWLIEHAGLKGFALGNAGVHAKQALVLVNLGHATGQDICRLALH VIARVNEVFGVKLEAEPRIMGLTGETSLDV
Specific function: Cell wall formation [H]
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790407, Length=334, Percent_Identity=50.2994011976048, Blast_Score=345, Evalue=2e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 [H]
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C [H]
EC number: =1.1.1.158 [H]
Molecular weight: Translated: 38233; Mature: 38102
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLSRQNITMSFPYSLKPFNTFGVEQSCLSMIEVHSKAELQSTCLSLYQSKRPMLVLGG CCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC GSNIVFTDDFNGTVVRVLTKGISCSEDGTHFYLAVEAGENWHELVHFSLNQDMPGLENLA CCEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHEEEECCCCCCCCCCEE LIPGTVGAAPIQNIGAYGVELCDICDWVEYLDLESGNLLRLTADECEFAYRESIFKGCLR ECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHH DKAVITAVGLRLPKAWQPKLAYGPLQSFNAETVTPREIFERVCEVRSEKLPNPEELGNAG CHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCC SFFKNPIVSAATYMQLAAHFPSIVGYAQPNGEVKLAAGWLIEHAGLKGFALGNAGVHAKQ HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEEEHHCCCCEEEECCCCCCCCE ALVLVNLGHATGQDICRLALHVIARVNEVFGVKLEAEPRIMGLTGETSLDV EEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCCC >Mature Secondary Structure SLLSRQNITMSFPYSLKPFNTFGVEQSCLSMIEVHSKAELQSTCLSLYQSKRPMLVLGG CCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC GSNIVFTDDFNGTVVRVLTKGISCSEDGTHFYLAVEAGENWHELVHFSLNQDMPGLENLA CCEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHEEEECCCCCCCCCCEE LIPGTVGAAPIQNIGAYGVELCDICDWVEYLDLESGNLLRLTADECEFAYRESIFKGCLR ECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHH DKAVITAVGLRLPKAWQPKLAYGPLQSFNAETVTPREIFERVCEVRSEKLPNPEELGNAG CHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCC SFFKNPIVSAATYMQLAAHFPSIVGYAQPNGEVKLAAGWLIEHAGLKGFALGNAGVHAKQ HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEEEHHCCCCEEEECCCCCCCCE ALVLVNLGHATGQDICRLALHVIARVNEVFGVKLEAEPRIMGLTGETSLDV EEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA