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The map label for this gene is 113968517

Identifier: 113968517

GI number: 113968517

Start: 192017

End: 192628

Strand: Direct

Name: 113968517

Synonym: Shewmr4_0172

Alternate gene names: NA

Gene position: 192017-192628 (Clockwise)

Preceding gene: 113968516

Following gene: 113968518

Centisome position: 4.08

GC content: 46.73

Gene sequence:

>612_bases
ATGGCGAGACGCAAAGAACATAGTCATGATGAGATTCGTGCTATGGCAGTAGAGGCGGCAATGGCATTGCTGCAACAGCA
AGGGACACAAGAACTGAGTTTACGCAAGATTGCTAGCCAGATTGGCTATGTGCCGAGTACCTTAATCAATATCTTTGGTA
GTTATAACTACCTACTGTTAGCCGTTTCTGAGGCAACGTTGCAGGCGCTGATGCACCAGCTCTCCGAGGTAAATGCTGAG
AATAGTCGCAATCAAATCATTAGCATGGCGCAAAAATACGCTGAGTTTGCCCATGCACAGCGCCAATGTTTTAAGTTGGT
ATTTGAACTGCAGTTACTCGACAGTGAACCTTTGCCCGAATCCCAAGGCCAACTTATCGCAGGCTTATTCAGTTTAATTG
AACGTGAGTTAGCCTTGTTGTTCCCCAATAAGACGGCTGCACAGCAACTCCAAATGAGCCGAGTACTCTGGGGCGGCATC
CACGGCCTCACCGCCTTATCACTGGATAATAAATTGTTTGCCGATACGGCATCTTTACCCGCTTTGTTAGAAAGTCATGT
GACAGGATATTTACAGGGAATGGGTTATCAGAGGGAAGCATCATGCTGCTAA

Upstream 100 bases:

>100_bases
GCCTTTTATTTCATGCTGTACGCAAAATAAACTTATTTTGAACGTTGTTTTTTATTTTTGAGACTGTTAATCTCACTGCA
TTCAACAGGGAGTGAGACCT

Downstream 100 bases:

>100_bases
CAAAACGTTTTTTACCGTATTTTGCAACCCAATGCCTTGGGGCGCTTAACGACAATATCTATAAAAATGTGTTGTTGCTG
CTGGTTACCTTCAGCCAAGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; AcrR Transcriptional Regulator; HTH-Type Transcriptional Regulator; TetR-Family Transcriptional Regulator

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MARRKEHSHDEIRAMAVEAAMALLQQQGTQELSLRKIASQIGYVPSTLINIFGSYNYLLLAVSEATLQALMHQLSEVNAE
NSRNQIISMAQKYAEFAHAQRQCFKLVFELQLLDSEPLPESQGQLIAGLFSLIERELALLFPNKTAAQQLQMSRVLWGGI
HGLTALSLDNKLFADTASLPALLESHVTGYLQGMGYQREASCC

Sequences:

>Translated_203_residues
MARRKEHSHDEIRAMAVEAAMALLQQQGTQELSLRKIASQIGYVPSTLINIFGSYNYLLLAVSEATLQALMHQLSEVNAE
NSRNQIISMAQKYAEFAHAQRQCFKLVFELQLLDSEPLPESQGQLIAGLFSLIERELALLFPNKTAAQQLQMSRVLWGGI
HGLTALSLDNKLFADTASLPALLESHVTGYLQGMGYQREASCC
>Mature_202_residues
ARRKEHSHDEIRAMAVEAAMALLQQQGTQELSLRKIASQIGYVPSTLINIFGSYNYLLLAVSEATLQALMHQLSEVNAEN
SRNQIISMAQKYAEFAHAQRQCFKLVFELQLLDSEPLPESQGQLIAGLFSLIERELALLFPNKTAAQQLQMSRVLWGGIH
GLTALSLDNKLFADTASLPALLESHVTGYLQGMGYQREASCC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22523; Mature: 22392

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRKEHSHDEIRAMAVEAAMALLQQQGTQELSLRKIASQIGYVPSTLINIFGSYNYLLL
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHEE
AVSEATLQALMHQLSEVNAENSRNQIISMAQKYAEFAHAQRQCFKLVFELQLLDSEPLPE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SQGQLIAGLFSLIERELALLFPNKTAAQQLQMSRVLWGGIHGLTALSLDNKLFADTASLP
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ALLESHVTGYLQGMGYQREASCC
HHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ARRKEHSHDEIRAMAVEAAMALLQQQGTQELSLRKIASQIGYVPSTLINIFGSYNYLLL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHEE
AVSEATLQALMHQLSEVNAENSRNQIISMAQKYAEFAHAQRQCFKLVFELQLLDSEPLPE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SQGQLIAGLFSLIERELALLFPNKTAAQQLQMSRVLWGGIHGLTALSLDNKLFADTASLP
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ALLESHVTGYLQGMGYQREASCC
HHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA