Click here to switch to the map view.

The map label for this gene is 113968516

Identifier: 113968516

GI number: 113968516

Start: 191343

End: 191786

Strand: Direct

Name: 113968516

Synonym: Shewmr4_0171

Alternate gene names: NA

Gene position: 191343-191786 (Clockwise)

Preceding gene: 113968515

Following gene: 113968517

Centisome position: 4.07

GC content: 49.1

Gene sequence:

>444_bases
ATGCAGTCGATTCGTCCAGTATTAAAGTCAGAGTTAGCCGACGTTTTTCAACTCGAACAGGCTATCTTTGGCGACCATTG
TTATCCCGATTTTTTCTTTCGCCAAGGATTTGATTGTTGGCCAGAGCATTTTCTGGTTGCCGTAGATGATGGCGGTAAGT
TGTTAGGCTATTTGCTCTGCGCTCAAAGTGGTGACCCTGCTTGTATGTGGATTCTCTCCGTGGCGGTGAGTGAGCAATCC
CGCGGGCGAGGCATTGGCAAACAATTAATCCAACAATGTTTAACTCAGCTACCGCCTCAGGTTAAGCGGGTGGATTTAAC
CGTCGATCCCCACAACCCAGCCCATGGTTTGTATCAGCGTTTAGGGTTTGTCGATACTGCCTTCGAAGCGGACTATTTTG
GCGCAGGGGCAGATAGAGTCGTGATGAGTTATCACTGCCGCTAG

Upstream 100 bases:

>100_bases
GACTTATAACGAGCGTGAGACGCTTGAAAATCCCAACTTTATTGTTGTTGGTGCGCCCAATTTAGAGTGGGATAAAATTT
TAATTGGTGAATAGTTTTAC

Downstream 100 bases:

>100_bases
GTAAAAGTTCAACCTCGAAATGGCGCCCTCGATTGAGGGCGTCATTTTTTTATGCGTTAAAAGTTAAGTTCCTTCCAAGG
TTTCCATCGAGCGATTGCCT

Product: GCN5-related N-acetyltransferase

Products: NA

Alternate protein names: GCN5-Related N-Acetyltransferase; Ribosomal-Protein-Alanine Acetyltransferase; GCN5-Like N-Acetyltransferase

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MQSIRPVLKSELADVFQLEQAIFGDHCYPDFFFRQGFDCWPEHFLVAVDDGGKLLGYLLCAQSGDPACMWILSVAVSEQS
RGRGIGKQLIQQCLTQLPPQVKRVDLTVDPHNPAHGLYQRLGFVDTAFEADYFGAGADRVVMSYHCR

Sequences:

>Translated_147_residues
MQSIRPVLKSELADVFQLEQAIFGDHCYPDFFFRQGFDCWPEHFLVAVDDGGKLLGYLLCAQSGDPACMWILSVAVSEQS
RGRGIGKQLIQQCLTQLPPQVKRVDLTVDPHNPAHGLYQRLGFVDTAFEADYFGAGADRVVMSYHCR
>Mature_147_residues
MQSIRPVLKSELADVFQLEQAIFGDHCYPDFFFRQGFDCWPEHFLVAVDDGGKLLGYLLCAQSGDPACMWILSVAVSEQS
RGRGIGKQLIQQCLTQLPPQVKRVDLTVDPHNPAHGLYQRLGFVDTAFEADYFGAGADRVVMSYHCR

Specific function: Unknown

COG id: COG0456

COG function: function code R; Acetyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16483; Mature: 16483

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSIRPVLKSELADVFQLEQAIFGDHCYPDFFFRQGFDCWPEHFLVAVDDGGKLLGYLLC
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEECCCCHHHHHHHH
AQSGDPACMWILSVAVSEQSRGRGIGKQLIQQCLTQLPPQVKRVDLTVDPHNPAHGLYQR
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHH
LGFVDTAFEADYFGAGADRVVMSYHCR
HCCHHHHHCCCCCCCCCCCEEEEECCC
>Mature Secondary Structure
MQSIRPVLKSELADVFQLEQAIFGDHCYPDFFFRQGFDCWPEHFLVAVDDGGKLLGYLLC
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEECCCCHHHHHHHH
AQSGDPACMWILSVAVSEQSRGRGIGKQLIQQCLTQLPPQVKRVDLTVDPHNPAHGLYQR
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHH
LGFVDTAFEADYFGAGADRVVMSYHCR
HCCHHHHHCCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA