| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113968493
Identifier: 113968493
GI number: 113968493
Start: 167411
End: 167824
Strand: Direct
Name: 113968493
Synonym: Shewmr4_0148
Alternate gene names: NA
Gene position: 167411-167824 (Clockwise)
Preceding gene: 113968489
Following gene: 113968495
Centisome position: 3.56
GC content: 44.69
Gene sequence:
>414_bases ATGACCATGCAACTTAGTGGCTCACTCGGTTTTACTATGACAACGCCATTCGAGGACATTATGAATATCACCTCATTTTT CGGTCAGCCCGAGTCGTTACAGCGCTGGATAAGAAAGTGCATCGAACAACCGGGATTAAGTTATTGGCTGGTTTATCAAG ATCTGGAACAAGGTGAATCCCTACAGCTGGCCACATTATTATTCCCGATAGTGGCTGATAGGGATCTCTCGGATGCCGAA ATCGATGCCTTTGAGGATGGCTTAGGCCGTAGTGACTATGGTTATCTGCTAAACACGGATCAAATAGAGGATGTGATTGA TAATCTTAAGCAGCAAAAAGCTCAGCCCAGTGAACAGGAACTGCTTGAAGCTATTCTCTTTTACTATGAGCGAGATGCGT TTATCTGCCTCTGA
Upstream 100 bases:
>100_bases TTGATGGACGCAGATGTCCTCTCGTATTCTTGGGGCGGGTTGAGTCGCGAGAACTCCCATCTGTTACTTGTATGCATCTT GGGAGTGGTGAATAGCCTCT
Downstream 100 bases:
>100_bases TGGGCTCTTTGCGGGACGTTGCGACTTAAGTTGAGATAAGCGCCCCCTGAGGTATCACTTCAGGGGCGCACTTCAGGGGC GCTAGTTTATTAAGGTTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MTMQLSGSLGFTMTTPFEDIMNITSFFGQPESLQRWIRKCIEQPGLSYWLVYQDLEQGESLQLATLLFPIVADRDLSDAE IDAFEDGLGRSDYGYLLNTDQIEDVIDNLKQQKAQPSEQELLEAILFYYERDAFICL
Sequences:
>Translated_137_residues MTMQLSGSLGFTMTTPFEDIMNITSFFGQPESLQRWIRKCIEQPGLSYWLVYQDLEQGESLQLATLLFPIVADRDLSDAE IDAFEDGLGRSDYGYLLNTDQIEDVIDNLKQQKAQPSEQELLEAILFYYERDAFICL >Mature_136_residues TMQLSGSLGFTMTTPFEDIMNITSFFGQPESLQRWIRKCIEQPGLSYWLVYQDLEQGESLQLATLLFPIVADRDLSDAEI DAFEDGLGRSDYGYLLNTDQIEDVIDNLKQQKAQPSEQELLEAILFYYERDAFICL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15764; Mature: 15633
Theoretical pI: Translated: 3.73; Mature: 3.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMQLSGSLGFTMTTPFEDIMNITSFFGQPESLQRWIRKCIEQPGLSYWLVYQDLEQGES CCEEECCCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCC LQLATLLFPIVADRDLSDAEIDAFEDGLGRSDYGYLLNTDQIEDVIDNLKQQKAQPSEQE HHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCHHH LLEAILFYYERDAFICL HHHHHHHHHCCCCEEEC >Mature Secondary Structure TMQLSGSLGFTMTTPFEDIMNITSFFGQPESLQRWIRKCIEQPGLSYWLVYQDLEQGES CEEECCCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCC LQLATLLFPIVADRDLSDAEIDAFEDGLGRSDYGYLLNTDQIEDVIDNLKQQKAQPSEQE HHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCHHH LLEAILFYYERDAFICL HHHHHHHHHCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA