The gene/protein map for NC_008321 is currently unavailable.
Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

Click here to switch to the map view.

The map label for this gene is 113968458

Identifier: 113968458

GI number: 113968458

Start: 127068

End: 127454

Strand: Direct

Name: 113968458

Synonym: Shewmr4_0113

Alternate gene names: NA

Gene position: 127068-127454 (Clockwise)

Preceding gene: 113968455

Following gene: 113968461

Centisome position: 2.7

GC content: 51.68

Gene sequence:

>387_bases
ATGAAATTTACTAAGATAATCAATATGAAAACCGCCGCAGTGGCGGGACTTTTCGCCATGACGCTAGGCACGCCTGCGAT
GGCTGCAGAAAAACCGTCCTTTGATTGCAGCAAAGTGCGCGCCGGCAGTATCGAGGAGCTGGTGTGTCAGGATGAGGGCT
TAATTAAGCTCGATCAACAACTCGCCGAGGTGTATACCAAGGCCACGGAAAAAGCCAAAAACGAACAACCGCCCACCCTC
AAAGCCATGCAGCGAGGATGGGTGAAGGGGCGTGATGAGTGTTGGAAGAGCGAAGATAAACGCGCCTGTGTTGAATCGAC
TTACCAGACGCGGATTGCCGAGTTACAGGCGCAGTATCGTTTGGTGGAAATTTGCTGTTATCGGTGA

Upstream 100 bases:

>100_bases
TATTGAGGGGTATTTTGCTTAAGTCAGCTTAGGTTAAGCCGAGATAAGGTTAGCTATGGACAAGAGATCGCTCGGGGTCC
TAGATAAAGGGAATGAAACA

Downstream 100 bases:

>100_bases
CATCTATCGCCGCCTCGGCACTGCCGCTGTAGCGCCATTCTGACTGGTTTAAGGTCTCGGAATAGATTAATTCACTGATG
GGGATTTGCCTTTGATTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MKFTKIINMKTAAVAGLFAMTLGTPAMAAEKPSFDCSKVRAGSIEELVCQDEGLIKLDQQLAEVYTKATEKAKNEQPPTL
KAMQRGWVKGRDECWKSEDKRACVESTYQTRIAELQAQYRLVEICCYR

Sequences:

>Translated_128_residues
MKFTKIINMKTAAVAGLFAMTLGTPAMAAEKPSFDCSKVRAGSIEELVCQDEGLIKLDQQLAEVYTKATEKAKNEQPPTL
KAMQRGWVKGRDECWKSEDKRACVESTYQTRIAELQAQYRLVEICCYR
>Mature_128_residues
MKFTKIINMKTAAVAGLFAMTLGTPAMAAEKPSFDCSKVRAGSIEELVCQDEGLIKLDQQLAEVYTKATEKAKNEQPPTL
KAMQRGWVKGRDECWKSEDKRACVESTYQTRIAELQAQYRLVEICCYR

Specific function: Unknown

COG id: COG4461

COG function: function code S; Uncharacterized protein conserved in bacteria, putative lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14431; Mature: 14431

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFTKIINMKTAAVAGLFAMTLGTPAMAAEKPSFDCSKVRAGSIEELVCQDEGLIKLDQQ
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHHCCCCCHHHHHH
LAEVYTKATEKAKNEQPPTLKAMQRGWVKGRDECWKSEDKRACVESTYQTRIAELQAQYR
HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LVEICCYR
HHHHHHCC
>Mature Secondary Structure
MKFTKIINMKTAAVAGLFAMTLGTPAMAAEKPSFDCSKVRAGSIEELVCQDEGLIKLDQQ
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHHCCCCCHHHHHH
LAEVYTKATEKAKNEQPPTLKAMQRGWVKGRDECWKSEDKRACVESTYQTRIAELQAQYR
HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LVEICCYR
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA