Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

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The map label for this gene is 113968437

Identifier: 113968437

GI number: 113968437

Start: 100931

End: 101944

Strand: Direct

Name: 113968437

Synonym: Shewmr4_0092

Alternate gene names: NA

Gene position: 100931-101944 (Clockwise)

Preceding gene: 113968436

Following gene: 113968438

Centisome position: 2.14

GC content: 45.07

Gene sequence:

>1014_bases
ATGAGTTCGATTGAATTTGATATTCCCGAAGATCACCGTATTCCCTTTCAGAAGTATTACAAACAAAAAATCGCCCCTAA
ATGCGCCCCGTTTGAAGCAAAGCGTGAAGGCGTGAACCAAAGGCGGCGTGAAAATGCCAAGTTTACCACCCCAATCTACT
ACATATGCATCACGGTTATTTTGGGTGCCTTCGCTGGGCTGCTCGGGGTGCAGTTTATGCTGGTGCCTATGGATTATTTT
GTGCCTTTGATGATTGGCGCGTTTCTGCCGACTCCCGTGATAGCGTTAGTGGCGATTGCCTCGGGAAAGGAAAGCAATGA
ACTCTATAATGCCGCCTTTGAAAAACTCTATCCCATTAGTCTCAAGTACTTTGGCAATGATTATGCGTTAACGAGGGAAC
CTAAGGTGGACTTCTCAACCTTCCTTGAGTTGGGGCTGTTGCCTAAAACCGATAAACAGTATGCACAAAATTGCCTTAAG
GGAACCTATAACAAGGTGCCGTTCAAGTTTTATGAGGTCGATGCTTACAACACTAAATCGAACAATAACGGCTCGGTTGA
GCGAGAGACCATCTTCAATGGTGTGCTACTGGTGTGCAATATTCCTAAGCGATTCAACGGTACGACCTTGTTAGTCACGG
ATAAGGGCAGTTTAAAAAATCGTATTGAGGGGTTTAAGACAAAGCTGTCGCGGGTCAAGCTTGAGGATGTACGTTTCGAG
CGTTGTTTTGAGGTGTATAGCAGCGACCAAGTCGAGGCGCGCTATTTACTCAATCCCTTGATGATGGAAAATCTCTTGGC
CCTAGGCCGCGAGCTAAATGCCGAGGTGGAAGCCTGTTTCTATCAAAAACAATTGCTGATTAAGATCCCGACAAAACACC
ATTTCTTTATCAATCAACTCGATTTAGATCGCCCCATCGATTTTAAGCTCAATATCGAGCGGATGTTTACCGAGTTAGGT
TATACCTTCTCGATCATCGATACCTTAAGGCTCGATAAACATACCGGGTTATAG

Upstream 100 bases:

>100_bases
GGGCTTAATCGGTCATTTGTTGGCCTTAAACTGGCCTTGCTGAAATAAAATCCGTAAAATCATTGGCCTAAATGGATTTG
AATCGTAAGAGTAGGAGCCA

Downstream 100 bases:

>100_bases
CAATAGTCGCCTCAATAGCAGCCACGTTCTGTGGCTGCTTTATGCGGCAGCTTAAAACATGACTTTTGGCACTTATGGGT
GACTCCCCGTGCTCGTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MSSIEFDIPEDHRIPFQKYYKQKIAPKCAPFEAKREGVNQRRRENAKFTTPIYYICITVILGAFAGLLGVQFMLVPMDYF
VPLMIGAFLPTPVIALVAIASGKESNELYNAAFEKLYPISLKYFGNDYALTREPKVDFSTFLELGLLPKTDKQYAQNCLK
GTYNKVPFKFYEVDAYNTKSNNNGSVERETIFNGVLLVCNIPKRFNGTTLLVTDKGSLKNRIEGFKTKLSRVKLEDVRFE
RCFEVYSSDQVEARYLLNPLMMENLLALGRELNAEVEACFYQKQLLIKIPTKHHFFINQLDLDRPIDFKLNIERMFTELG
YTFSIIDTLRLDKHTGL

Sequences:

>Translated_337_residues
MSSIEFDIPEDHRIPFQKYYKQKIAPKCAPFEAKREGVNQRRRENAKFTTPIYYICITVILGAFAGLLGVQFMLVPMDYF
VPLMIGAFLPTPVIALVAIASGKESNELYNAAFEKLYPISLKYFGNDYALTREPKVDFSTFLELGLLPKTDKQYAQNCLK
GTYNKVPFKFYEVDAYNTKSNNNGSVERETIFNGVLLVCNIPKRFNGTTLLVTDKGSLKNRIEGFKTKLSRVKLEDVRFE
RCFEVYSSDQVEARYLLNPLMMENLLALGRELNAEVEACFYQKQLLIKIPTKHHFFINQLDLDRPIDFKLNIERMFTELG
YTFSIIDTLRLDKHTGL
>Mature_336_residues
SSIEFDIPEDHRIPFQKYYKQKIAPKCAPFEAKREGVNQRRRENAKFTTPIYYICITVILGAFAGLLGVQFMLVPMDYFV
PLMIGAFLPTPVIALVAIASGKESNELYNAAFEKLYPISLKYFGNDYALTREPKVDFSTFLELGLLPKTDKQYAQNCLKG
TYNKVPFKFYEVDAYNTKSNNNGSVERETIFNGVLLVCNIPKRFNGTTLLVTDKGSLKNRIEGFKTKLSRVKLEDVRFER
CFEVYSSDQVEARYLLNPLMMENLLALGRELNAEVEACFYQKQLLIKIPTKHHFFINQLDLDRPIDFKLNIERMFTELGY
TFSIIDTLRLDKHTGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38873; Mature: 38741

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSIEFDIPEDHRIPFQKYYKQKIAPKCAPFEAKREGVNQRRRENAKFTTPIYYICITVI
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LGAFAGLLGVQFMLVPMDYFVPLMIGAFLPTPVIALVAIASGKESNELYNAAFEKLYPIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEE
LKYFGNDYALTREPKVDFSTFLELGLLPKTDKQYAQNCLKGTYNKVPFKFYEVDAYNTKS
EEEECCCEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCC
NNNGSVERETIFNGVLLVCNIPKRFNGTTLLVTDKGSLKNRIEGFKTKLSRVKLEDVRFE
CCCCCCHHHHHHCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
RCFEVYSSDQVEARYLLNPLMMENLLALGRELNAEVEACFYQKQLLIKIPTKHHFFINQL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCEEEEECCCCCCEEEEEE
DLDRPIDFKLNIERMFTELGYTFSIIDTLRLDKHTGL
CCCCCCCEEEEHHHHHHHHCCCEEEHHHHHHHHCCCC
>Mature Secondary Structure 
SSIEFDIPEDHRIPFQKYYKQKIAPKCAPFEAKREGVNQRRRENAKFTTPIYYICITVI
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LGAFAGLLGVQFMLVPMDYFVPLMIGAFLPTPVIALVAIASGKESNELYNAAFEKLYPIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEE
LKYFGNDYALTREPKVDFSTFLELGLLPKTDKQYAQNCLKGTYNKVPFKFYEVDAYNTKS
EEEECCCEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCC
NNNGSVERETIFNGVLLVCNIPKRFNGTTLLVTDKGSLKNRIEGFKTKLSRVKLEDVRFE
CCCCCCHHHHHHCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
RCFEVYSSDQVEARYLLNPLMMENLLALGRELNAEVEACFYQKQLLIKIPTKHHFFINQL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCEEEEECCCCCCEEEEEE
DLDRPIDFKLNIERMFTELGYTFSIIDTLRLDKHTGL
CCCCCCCEEEEHHHHHHHHCCCEEEHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA