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The map label for this gene is pcaC [H]

Identifier: 113968434

GI number: 113968434

Start: 98922

End: 99308

Strand: Direct

Name: pcaC [H]

Synonym: Shewmr4_0089

Alternate gene names: 113968434

Gene position: 98922-99308 (Clockwise)

Preceding gene: 113968433

Following gene: 113968436

Centisome position: 2.1

GC content: 44.19

Gene sequence:

>387_bases
ATGAGTAATCAAAGATATGTGCAGGGGCTCGCTAAACTAACTGAAATAGACGGTGAAGCGGGTGAGAAAGTCATTCGCAG
TCTTGCCGATATTTGCCCAGACTTAGGCAAGTACATTATTGAATATCCTTTTGGGGATATTTATCAGCGTGAAGGACTCG
ATCTTAAGACGCGTGAGCTAGTCACAGTTGCCGCACTCACAGCGCTAGGGCATTGCCAGCCACAGTTAAATGTACATATT
AATGGCGCATTGAATGTTGGTTGTACACCGCAGGAAATTGTGGAGGTGATATTGCAAATGTCTGTTTATGTTGGTTTTCC
TGCAGCTCTGAATGGCATGTTTGTCGCTAAGACAGTATTTTCCGAACGGGCGATAAGTGTCGTTTAA

Upstream 100 bases:

>100_bases
TTAGAGTCTGCATTGCCAGTGTCATGCATCAATGAGCTATTGACTTAGAGTGAACTCTAAGATTTAGGCTTGCGGTGAGT
TAATTCAACTGGAGCTAAAC

Downstream 100 bases:

>100_bases
GCAATAAACAAAAAGCGACCCTTGGGTCGCTTTTTGTGTGCAGTGCCGATGTTAGTCGATCACTAGCTCATCAAAACTGT
TGATAGTGCGAAAATCGCCG

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MSNQRYVQGLAKLTEIDGEAGEKVIRSLADICPDLGKYIIEYPFGDIYQREGLDLKTRELVTVAALTALGHCQPQLNVHI
NGALNVGCTPQEIVEVILQMSVYVGFPAALNGMFVAKTVFSERAISVV

Sequences:

>Translated_128_residues
MSNQRYVQGLAKLTEIDGEAGEKVIRSLADICPDLGKYIIEYPFGDIYQREGLDLKTRELVTVAALTALGHCQPQLNVHI
NGALNVGCTPQEIVEVILQMSVYVGFPAALNGMFVAKTVFSERAISVV
>Mature_127_residues
SNQRYVQGLAKLTEIDGEAGEKVIRSLADICPDLGKYIIEYPFGDIYQREGLDLKTRELVTVAALTALGHCQPQLNVHIN
GALNVGCTPQEIVEVILQMSVYVGFPAALNGMFVAKTVFSERAISVV

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 13954; Mature: 13823

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQRYVQGLAKLTEIDGEAGEKVIRSLADICPDLGKYIIEYPFGDIYQREGLDLKTREL
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHH
VTVAALTALGHCQPQLNVHINGALNVGCTPQEIVEVILQMSVYVGFPAALNGMFVAKTVF
HHHHHHHHHHCCCCCEEEEECCEEECCCCHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHH
SERAISVV
HHHHHCCC
>Mature Secondary Structure 
SNQRYVQGLAKLTEIDGEAGEKVIRSLADICPDLGKYIIEYPFGDIYQREGLDLKTREL
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHH
VTVAALTALGHCQPQLNVHINGALNVGCTPQEIVEVILQMSVYVGFPAALNGMFVAKTVF
HHHHHHHHHHCCCCCEEEEECCEEECCCCHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHH
SERAISVV
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]