The gene/protein map for NC_008321 is currently unavailable.
Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

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The map label for this gene is yhjX [H]

Identifier: 113968403

GI number: 113968403

Start: 67822

End: 69066

Strand: Direct

Name: yhjX [H]

Synonym: Shewmr4_0058

Alternate gene names: 113968403

Gene position: 67822-69066 (Clockwise)

Preceding gene: 113968402

Following gene: 113968405

Centisome position: 1.44

GC content: 49.08

Gene sequence:

>1245_bases
ATGACTAAAGAGATGAACCGTACTCGGTACCTGACCTTAGTTGGTACTATTATCACCCAGTTTGCACTCGGCTCTGTTTA
CACTTGGAGCCTGTTCAATGCGCAATTGGCTGCAAAGCTCGATGAACCCGTTAGCCAAGTGGCATTTGTGTTTGGTTTAC
TGAGTTTGTCTTTGGCCGTGGCTTCTTCCATGGCGGGTAAATTACAGGAACGCTTCGGCGTGCGTAATGTCACCTTAGGT
GCAGGTGTGTTACTCGGGTTGGGATTCTTACTCACAGCCCAAGCCAGTAACTTGATGATGCTTTACCTGTGTGCCGGGAT
TTTAGTGGGCTTTGCCGATGGCACTGGCTACTTGATGACCTTGTCTAACTGCGTGAAGTGGTTCCCCGAACGCAAAGGGC
TGATTTCGGCATTAGCGATTGGTGCTTATGGTCTAGGTAGTCTCGGATTCAAGTACATCAACATGTTGTTACTCGAAAAC
ACAGGCCTTGAAACTACCTTCCAACTGTGGGGCCTAATCGCCATGGCGCTAGTTTTGTGTGGCGGCATGTTGATGAAAGA
TGCGCCAGCACAATCCGCCGCAAGTCAGCAAGCCGAAAGCCGCGACTTCACCCTCGCAGAAGCCATGAGTAAGCCACAAT
ACTGGATGTTGGCGCTGATGTTCCTATCGGCCTGTATGAGTGGTTTATATGTGATTGGTGTGGCGAAAGATATCGGCGAG
AAGATGGTCGACTTGCCCGTACTAGTCGCCGCCAATGCGGTTGCTGTCATTGCGATGGCGAACCTCTGTGGTCGCTTGGT
GCTGGGTATTCTGTCGGACAAAATCCCTCGTATTCGGGTCATTTCGCTGGCGCAGATCATCACCTTAGTCGGTATGGTGT
TACTGTTGTTTGTACCTTTGAATGCTAACTTGTTCTTCGTCGCGGTCGCCTGCGTTGCCTTTAGTTTTGGTGGCACTATT
ACTGTTTATCCCTCATTGGTGAGTGACTTCTTCGGCCTGAATAACCTGACTAAAAATTATGGTGTTATCTACTTAGGTTT
TGGTATAGGCAGCATTATAGGTTCGATTGTCGCCTCGTTATTCGGTGGCTTTATCGCGACCTTCAACGTGATTCTAGTGC
TGCTGGTGGTGGCGTTAGTGATGTCATTAACCATACGTTTGCCAGAACCTAAAACTCCAGCATCAGCCAAGAAAGCGACC
AAGAGCACAACCCACTTAGTGAACATGGCGACTGAATCGGCGTAA

Upstream 100 bases:

>100_bases
TCATTCCTGCAGATCTGTATTTCATGCCTTAATTGATCGGCGCCAATTGCATCTCTCTTATAGTGGACTCAATTCCTGAT
CCCCTAAAGCGAGATGCATC

Downstream 100 bases:

>100_bases
GCACAAACACTTTGCCCTCTTAGCCAAGAGCTCAAACAAAAATCCGCAGCCAAATAGCTGCGGACTTTTAATGTCAATTG
AAGTGAAAATTATAGATTTA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MTKEMNRTRYLTLVGTIITQFALGSVYTWSLFNAQLAAKLDEPVSQVAFVFGLLSLSLAVASSMAGKLQERFGVRNVTLG
AGVLLGLGFLLTAQASNLMMLYLCAGILVGFADGTGYLMTLSNCVKWFPERKGLISALAIGAYGLGSLGFKYINMLLLEN
TGLETTFQLWGLIAMALVLCGGMLMKDAPAQSAASQQAESRDFTLAEAMSKPQYWMLALMFLSACMSGLYVIGVAKDIGE
KMVDLPVLVAANAVAVIAMANLCGRLVLGILSDKIPRIRVISLAQIITLVGMVLLLFVPLNANLFFVAVACVAFSFGGTI
TVYPSLVSDFFGLNNLTKNYGVIYLGFGIGSIIGSIVASLFGGFIATFNVILVLLVVALVMSLTIRLPEPKTPASAKKAT
KSTTHLVNMATESA

Sequences:

>Translated_414_residues
MTKEMNRTRYLTLVGTIITQFALGSVYTWSLFNAQLAAKLDEPVSQVAFVFGLLSLSLAVASSMAGKLQERFGVRNVTLG
AGVLLGLGFLLTAQASNLMMLYLCAGILVGFADGTGYLMTLSNCVKWFPERKGLISALAIGAYGLGSLGFKYINMLLLEN
TGLETTFQLWGLIAMALVLCGGMLMKDAPAQSAASQQAESRDFTLAEAMSKPQYWMLALMFLSACMSGLYVIGVAKDIGE
KMVDLPVLVAANAVAVIAMANLCGRLVLGILSDKIPRIRVISLAQIITLVGMVLLLFVPLNANLFFVAVACVAFSFGGTI
TVYPSLVSDFFGLNNLTKNYGVIYLGFGIGSIIGSIVASLFGGFIATFNVILVLLVVALVMSLTIRLPEPKTPASAKKAT
KSTTHLVNMATESA
>Mature_413_residues
TKEMNRTRYLTLVGTIITQFALGSVYTWSLFNAQLAAKLDEPVSQVAFVFGLLSLSLAVASSMAGKLQERFGVRNVTLGA
GVLLGLGFLLTAQASNLMMLYLCAGILVGFADGTGYLMTLSNCVKWFPERKGLISALAIGAYGLGSLGFKYINMLLLENT
GLETTFQLWGLIAMALVLCGGMLMKDAPAQSAASQQAESRDFTLAEAMSKPQYWMLALMFLSACMSGLYVIGVAKDIGEK
MVDLPVLVAANAVAVIAMANLCGRLVLGILSDKIPRIRVISLAQIITLVGMVLLLFVPLNANLFFVAVACVAFSFGGTIT
VYPSLVSDFFGLNNLTKNYGVIYLGFGIGSIIGSIVASLFGGFIATFNVILVLLVVALVMSLTIRLPEPKTPASAKKATK
STTHLVNMATESA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI42475555, Length=358, Percent_Identity=26.2569832402235, Blast_Score=76, Evalue=5e-14,
Organism=Escherichia coli, GI1789969, Length=387, Percent_Identity=71.8346253229974, Blast_Score=553, Evalue=1e-159,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR004741 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43976; Mature: 43845

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TKEMNRTRYLTLVGTIITQFALGSVYTWSLFNAQLAAKLDEPVSQVAFVFGLLSLSLAV
CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSMAGKLQERFGVRNVTLGAGVLLGLGFLLTAQASNLMMLYLCAGILVGFADGTGYLMT
HHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHH
LSNCVKWFPERKGLISALAIGAYGLGSLGFKYINMLLLENTGLETTFQLWGLIAMALVLC
HHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
GGMLMKDAPAQSAASQQAESRDFTLAEAMSKPQYWMLALMFLSACMSGLYVIGVAKDIGE
CCHHHCCCCCHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEHHHHHHH
KMVDLPVLVAANAVAVIAMANLCGRLVLGILSDKIPRIRVISLAQIITLVGMVLLLFVPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
NANLFFVAVACVAFSFGGTITVYPSLVSDFFGLNNLTKNYGVIYLGFGIGSIIGSIVASL
CCCHHHHHHHHHHHHCCCEEEECHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHH
FGGFIATFNVILVLLVVALVMSLTIRLPEPKTPASAKKATKSTTHLVNMATESA
HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]