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The map label for this gene is yibN [H]

Identifier: 113968391

GI number: 113968391

Start: 53881

End: 54315

Strand: Direct

Name: yibN [H]

Synonym: Shewmr4_0046

Alternate gene names: 113968391

Gene position: 53881-54315 (Clockwise)

Preceding gene: 113968387

Following gene: 113968392

Centisome position: 1.14

GC content: 41.38

Gene sequence:

>435_bases
ATGCAAGAATATATCGAATTTTTTAAGGCTCACACTATGCTAAGTCTGGCTTGGGTGGGTTTGTTTGTAATGCTTGTGGT
CAGTGTGATCAAATCGAGCTTCTCTAAAATCAAAAATGTCACTCATCAAGAACTCACCACTATGGTGAACAGACAAGACG
CTAAAGTCGTGGATGTGCGTTCAAATGACGAGTTCCGTAAGGGCCATATTGTTGATGCAGTTAACGTTACGCTCGCGGAT
ATCAAAAATAATCAGGTTTCAGCCCTTGAAAAGTTCAAAGGCAGTCCCATTATACTGGTATGCAATGCTGGCATGACCTC
GTCTCAAGCGGCTCAGCTTTTAAGTAAACAAGGTTTTGAAAACCTGTATAACTTGAAAGGTGGTATGGGTGAATGGCAGG
CAGCGAATATGCCTGTTTCAAAAAGCAAAAGATAA

Upstream 100 bases:

>100_bases
CTGTGTTCTAGAACTGTGACTAAACTGCTGCAATCTGCTAAGGCAATCGGTATACTCTGTGCCCTTATCGAATTTTTCGC
CATTTATACGGGCTGTAACC

Downstream 100 bases:

>100_bases
GTTGTCGGCGGCAGTTATGCGCTGTGCTGCATAGTTAACTGATTGTGCAGCAGTTGCGTCATCATTGTTTGGCATACTAA
TCCTGTGGTCACTAAGGGCT

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MQEYIEFFKAHTMLSLAWVGLFVMLVVSVIKSSFSKIKNVTHQELTTMVNRQDAKVVDVRSNDEFRKGHIVDAVNVTLAD
IKNNQVSALEKFKGSPIILVCNAGMTSSQAAQLLSKQGFENLYNLKGGMGEWQAANMPVSKSKR

Sequences:

>Translated_144_residues
MQEYIEFFKAHTMLSLAWVGLFVMLVVSVIKSSFSKIKNVTHQELTTMVNRQDAKVVDVRSNDEFRKGHIVDAVNVTLAD
IKNNQVSALEKFKGSPIILVCNAGMTSSQAAQLLSKQGFENLYNLKGGMGEWQAANMPVSKSKR
>Mature_144_residues
MQEYIEFFKAHTMLSLAWVGLFVMLVVSVIKSSFSKIKNVTHQELTTMVNRQDAKVVDVRSNDEFRKGHIVDAVNVTLAD
IKNNQVSALEKFKGSPIILVCNAGMTSSQAAQLLSKQGFENLYNLKGGMGEWQAANMPVSKSKR

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1790040, Length=143, Percent_Identity=41.958041958042, Blast_Score=131, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 16024; Mature: 16024

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEYIEFFKAHTMLSLAWVGLFVMLVVSVIKSSFSKIKNVTHQELTTMVNRQDAKVVDVR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEC
SNDEFRKGHIVDAVNVTLADIKNNQVSALEKFKGSPIILVCNAGMTSSQAAQLLSKQGFE
CCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
NLYNLKGGMGEWQAANMPVSKSKR
HHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQEYIEFFKAHTMLSLAWVGLFVMLVVSVIKSSFSKIKNVTHQELTTMVNRQDAKVVDVR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEC
SNDEFRKGHIVDAVNVTLADIKNNQVSALEKFKGSPIILVCNAGMTSSQAAQLLSKQGFE
CCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
NLYNLKGGMGEWQAANMPVSKSKR
HHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]