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The map label for this gene is fliH [H]

Identifier: 116696306

GI number: 116696306

Start: 2682491

End: 2683309

Strand: Direct

Name: fliH [H]

Synonym: H16_B2370

Alternate gene names: 116696306

Gene position: 2682491-2683309 (Clockwise)

Preceding gene: 116696305

Following gene: 116696307

Centisome position: 92.1

GC content: 74.6

Gene sequence:

>819_bases
ATGCCTATGTCTGAGGCAAACCCTGAGCGCGGCCAGGCCGCACGCCGCGCGCCGCGCGGCGACCCGCTCTCTTCCCTTGC
CGGCAACGGCGCGGCCGCCGATCCTGGCGGCTTTGCGCCGTTCGAGCCCCCGCGCCGCGCGCGTGGCGGCGCGGCCGGCT
GGCAGCGCTGGCAGATGGGCTCGCTCGATCCCCGGGAAAGCGAGCCGCCCGAAGCCCTGGCCGCCATGCCATCCGAGCCC
GCACCGCCGCCGATCGATTTCGAGGCGCTCGACGCGATGCGCGAAGGCGCGCGCAAGGAAGGCTATGCCCAGGGCTACAC
CCAGGGGCAAACCCAGGGCTACGGCGACGGCCACCGCGAAGGCTACGCCCGCGGCCTTGAAGCCGCACGCAACGAGGCCA
CGCAGCTGCAGGCGCTGGCCACCAACTTCCGCAGCGCGCTCGGCGGCGTGGACGACCAGGTCGCGCGCGCGCTGGTGTCG
CTGGCGCTCGACGTGGCGCGCCAGCTGGTGCGCACCGCCCTGGCAAACGACCCCGCGGTGCTGCTGCCGGCCGTGCGCGA
GCTGCTGACCAGCGAACCCGCGCTGTGCGGATCGCCCAGCCTGCTGCTGCATCCCGACGACGTGGCGCTGGTGGAAACCC
ACCTGCATGGCGAACTGGCGGCCGCCGGCTGGACCGTGCGCGCCGATCCGTCGGTGGCGCGCGGCGGCTGCATCGCCAGC
GCCGCCAGCGGCGAGCGCGATGCCACGCTGCCTACGCGCTGGACCCGCGTGGTCAAGGCGCTGGGCCGCGACGATCCATG
GGAGCCGCCACATGCCTGA

Upstream 100 bases:

>100_bases
CCGGTGCGCGTGTCGCAGGTCGAGGCCGAGCAGAAGGCCATCCTGCAGGTGGTAAGGCGCCTGGCGGATGCGGGCGAAGT
GCAGATCGGCGGAGGCGACG

Downstream 100 bases:

>100_bases
CGCCGCCGAGCAGGCCACGCCAGCGCCGGATCCCGCGCTGGCCCATGCGCAACGCTGGATCGGCGCGCTGGATAGCGCCG
CGGCCGGCATCGCCGGGCTC

Product: flagellar assembly protein H

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MPMSEANPERGQAARRAPRGDPLSSLAGNGAAADPGGFAPFEPPRRARGGAAGWQRWQMGSLDPRESEPPEALAAMPSEP
APPPIDFEALDAMREGARKEGYAQGYTQGQTQGYGDGHREGYARGLEAARNEATQLQALATNFRSALGGVDDQVARALVS
LALDVARQLVRTALANDPAVLLPAVRELLTSEPALCGSPSLLLHPDDVALVETHLHGELAAAGWTVRADPSVARGGCIAS
AASGERDATLPTRWTRVVKALGRDDPWEPPHA

Sequences:

>Translated_272_residues
MPMSEANPERGQAARRAPRGDPLSSLAGNGAAADPGGFAPFEPPRRARGGAAGWQRWQMGSLDPRESEPPEALAAMPSEP
APPPIDFEALDAMREGARKEGYAQGYTQGQTQGYGDGHREGYARGLEAARNEATQLQALATNFRSALGGVDDQVARALVS
LALDVARQLVRTALANDPAVLLPAVRELLTSEPALCGSPSLLLHPDDVALVETHLHGELAAAGWTVRADPSVARGGCIAS
AASGERDATLPTRWTRVVKALGRDDPWEPPHA
>Mature_271_residues
PMSEANPERGQAARRAPRGDPLSSLAGNGAAADPGGFAPFEPPRRARGGAAGWQRWQMGSLDPRESEPPEALAAMPSEPA
PPPIDFEALDAMREGARKEGYAQGYTQGQTQGYGDGHREGYARGLEAARNEATQLQALATNFRSALGGVDDQVARALVSL
ALDVARQLVRTALANDPAVLLPAVRELLTSEPALCGSPSLLLHPDDVALVETHLHGELAAAGWTVRADPSVARGGCIASA
ASGERDATLPTRWTRVVKALGRDDPWEPPHA

Specific function: Needed for flagellar regrowth and assembly [H]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliH family [H]

Homologues:

Organism=Escherichia coli, GI87082004, Length=215, Percent_Identity=31.1627906976744, Blast_Score=105, Evalue=3e-24,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000563
- InterPro:   IPR018035 [H]

Pfam domain/function: PF02108 FliH [H]

EC number: NA

Molecular weight: Translated: 28610; Mature: 28479

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMSEANPERGQAARRAPRGDPLSSLAGNGAAADPGGFAPFEPPRRARGGAAGWQRWQMG
CCCCCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHCCCC
SLDPRESEPPEALAAMPSEPAPPPIDFEALDAMREGARKEGYAQGYTQGQTQGYGDGHRE
CCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHH
GYARGLEAARNEATQLQALATNFRSALGGVDDQVARALVSLALDVARQLVRTALANDPAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LLPAVRELLTSEPALCGSPSLLLHPDDVALVETHLHGELAAAGWTVRADPSVARGGCIAS
HHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHCCHHHHCCCEEECCCCHHCCCCHHC
AASGERDATLPTRWTRVVKALGRDDPWEPPHA
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PMSEANPERGQAARRAPRGDPLSSLAGNGAAADPGGFAPFEPPRRARGGAAGWQRWQMG
CCCCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHCCCC
SLDPRESEPPEALAAMPSEPAPPPIDFEALDAMREGARKEGYAQGYTQGQTQGYGDGHRE
CCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHH
GYARGLEAARNEATQLQALATNFRSALGGVDDQVARALVSLALDVARQLVRTALANDPAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LLPAVRELLTSEPALCGSPSLLLHPDDVALVETHLHGELAAAGWTVRADPSVARGGCIAS
HHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHCCHHHHCCCEEECCCCHHCCCCHHC
AASGERDATLPTRWTRVVKALGRDDPWEPPHA
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1646201; 11677609; 2656645 [H]