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The map label for this gene is oruR [H]

Identifier: 116696194

GI number: 116696194

Start: 2554698

End: 2555732

Strand: Direct

Name: oruR [H]

Synonym: H16_B2258

Alternate gene names: 116696194

Gene position: 2554698-2555732 (Clockwise)

Preceding gene: 116696192

Following gene: 116696196

Centisome position: 87.72

GC content: 72.95

Gene sequence:

>1035_bases
ATGACAATGACACAACAAGAGCCTATCCAGGCCGGGCCGTTGCCTCGTGACCTGCTGCACGCACTGCGTGACGGCGGCTA
CGACGTATCGGGACTCGCGCCTGCCCCGGAATCCGACACCGACTCCGACCCCAGCGACCTCAGGCCCGCCATGCCGGCGG
CCGGCCCGCAACAGGCCTGCCACGTGCTCTGCGCGGTCTACCGTGCCACCGGCGATCCAACCATCGGCCTGTGGCTGGGC
AGCCGGATGCAGACCGACCTGCTCGGGCTGGCGGGCCTGACGGCCATGGCCGGGCCGTCGCTGGGCACCGCGCTGCGGCG
CATCGCGCGCTACCAGAAGCTGCTCGCCGGCGACCGCATCGAACTGCGCCGCCAGGGCGACGAAGCCTGGGTCTGTATCC
GCCCGAGCGATCCCGAGGCGCCCGACACCCGACCGCGCATCGACATGGAGCTGTGCTCGCTGCTGGCCTTCGGGCGCCAG
TTCACGCGCAAGCCGCTGCATCCGCTGCGGGTGTCGCTGCGCATCGGCCAGCCGGACTGGCACCTGCGCTATACCGAAGC
ATTCGACTGCCCGGTGCGCTTTGGCGAGCCCGAAGACGCCATCGTGTTCGGCCGCCGCGACCTGGCCTTGCGCCTGGCTG
CCCGCGTGCGCAGCGGACCGGCCGGCGCGGGCGCGGGCCATGCCGCGCGCGAAGCGCGGCCGGCGTCCGCGTCGCTGGAC
GATGTGCGCGCGGCCCTGCAGGCGCTGGCCGGCGACCGCGCCCTCAGCCTGGCCGCGGTGGCACGCCACCTGGACATCAG
CGAGCGCACGCTGCAGCGCCGGCTGATGGCGGCGGGCACGAGTTTCCGCACGCTGTGTGAAGAGGCGCGCCGCGAGCTGG
CTGGCGGCTACCTGGCCGGAGGCGCGATGTCGCTCGGAGAAATCGCGTTCCGGCTCGGCTTTGACGATGCCAACTCGTTC
TTCCGCGCCTTCCGCCGCTGGACCGGCATGACCCCGGGCGACTACCGGCGCGCGGCGGCGCCTCCACCCGCGTAG

Upstream 100 bases:

>100_bases
TCATCCCCCCGCACTCCCTTGAAGGGGGCACCGGCACCGCGTAATCTCAGTGTTACCGGGGGCTGCACTGGCGCACTTGC
GCCAACTTGCCAGCCAGATA

Downstream 100 bases:

>100_bases
GGCAGGCCGGCTCACCCGCCGTGGGGTTGCTCCCACGGCGGGTTGTCGCCGAAGCGCCCGGCCAGGAAATCGACAAAGGC
GCGCACGCGCGGGGGCACCA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MTMTQQEPIQAGPLPRDLLHALRDGGYDVSGLAPAPESDTDSDPSDLRPAMPAAGPQQACHVLCAVYRATGDPTIGLWLG
SRMQTDLLGLAGLTAMAGPSLGTALRRIARYQKLLAGDRIELRRQGDEAWVCIRPSDPEAPDTRPRIDMELCSLLAFGRQ
FTRKPLHPLRVSLRIGQPDWHLRYTEAFDCPVRFGEPEDAIVFGRRDLALRLAARVRSGPAGAGAGHAAREARPASASLD
DVRAALQALAGDRALSLAAVARHLDISERTLQRRLMAAGTSFRTLCEEARRELAGGYLAGGAMSLGEIAFRLGFDDANSF
FRAFRRWTGMTPGDYRRAAAPPPA

Sequences:

>Translated_344_residues
MTMTQQEPIQAGPLPRDLLHALRDGGYDVSGLAPAPESDTDSDPSDLRPAMPAAGPQQACHVLCAVYRATGDPTIGLWLG
SRMQTDLLGLAGLTAMAGPSLGTALRRIARYQKLLAGDRIELRRQGDEAWVCIRPSDPEAPDTRPRIDMELCSLLAFGRQ
FTRKPLHPLRVSLRIGQPDWHLRYTEAFDCPVRFGEPEDAIVFGRRDLALRLAARVRSGPAGAGAGHAAREARPASASLD
DVRAALQALAGDRALSLAAVARHLDISERTLQRRLMAAGTSFRTLCEEARRELAGGYLAGGAMSLGEIAFRLGFDDANSF
FRAFRRWTGMTPGDYRRAAAPPPA
>Mature_343_residues
TMTQQEPIQAGPLPRDLLHALRDGGYDVSGLAPAPESDTDSDPSDLRPAMPAAGPQQACHVLCAVYRATGDPTIGLWLGS
RMQTDLLGLAGLTAMAGPSLGTALRRIARYQKLLAGDRIELRRQGDEAWVCIRPSDPEAPDTRPRIDMELCSLLAFGRQF
TRKPLHPLRVSLRIGQPDWHLRYTEAFDCPVRFGEPEDAIVFGRRDLALRLAARVRSGPAGAGAGHAAREARPASASLDD
VRAALQALAGDRALSLAAVARHLDISERTLQRRLMAAGTSFRTLCEEARRELAGGYLAGGAMSLGEIAFRLGFDDANSFF
RAFRRWTGMTPGDYRRAAAPPPA

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37244; Mature: 37113

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMTQQEPIQAGPLPRDLLHALRDGGYDVSGLAPAPESDTDSDPSDLRPAMPAAGPQQAC
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHH
HVLCAVYRATGDPTIGLWLGSRMQTDLLGLAGLTAMAGPSLGTALRRIARYQKLLAGDRI
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHH
ELRRQGDEAWVCIRPSDPEAPDTRPRIDMELCSLLAFGRQFTRKPLHPLRVSLRIGQPDW
HEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
HLRYTEAFDCPVRFGEPEDAIVFGRRDLALRLAARVRSGPAGAGAGHAAREARPASASLD
EEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHH
DVRAALQALAGDRALSLAAVARHLDISERTLQRRLMAAGTSFRTLCEEARRELAGGYLAG
HHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
GAMSLGEIAFRLGFDDANSFFRAFRRWTGMTPGDYRRAAAPPPA
CHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TMTQQEPIQAGPLPRDLLHALRDGGYDVSGLAPAPESDTDSDPSDLRPAMPAAGPQQAC
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHH
HVLCAVYRATGDPTIGLWLGSRMQTDLLGLAGLTAMAGPSLGTALRRIARYQKLLAGDRI
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHH
ELRRQGDEAWVCIRPSDPEAPDTRPRIDMELCSLLAFGRQFTRKPLHPLRVSLRIGQPDW
HEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
HLRYTEAFDCPVRFGEPEDAIVFGRRDLALRLAARVRSGPAGAGAGHAAREARPASASLD
EEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHH
DVRAALQALAGDRALSLAAVARHLDISERTLQRRLMAAGTSFRTLCEEARRELAGGYLAG
HHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
GAMSLGEIAFRLGFDDANSFFRAFRRWTGMTPGDYRRAAAPPPA
CHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]