Click here to switch to the map view.

The map label for this gene is frc [H]

Identifier: 116696095

GI number: 116696095

Start: 2442272

End: 2443477

Strand: Direct

Name: frc [H]

Synonym: H16_B2159

Alternate gene names: 116696095

Gene position: 2442272-2443477 (Clockwise)

Preceding gene: 116696089

Following gene: 116696096

Centisome position: 83.86

GC content: 63.27

Gene sequence:

>1206_bases
ATGAACGCAAGCGACATGACGAACGACCAGAAGAAGCCGGACGCCACCGCTCCCCGAGGCCCTCTTGCCGGTATCCGCGT
GCTGGATCTGACCGCGGTGGTACTGGGTCCCGTCGCCACCCAGGTGCTGGCGGACTATGGCGCCGAGGTGATCAAGGTAG
AACCTCCCGAGGGCGACCTGATGCGTGCAAACGGCGTGAGCCGCACGCCCGGCATGAGTTCCACCTTCATGAATATCAAC
CGCAACAAGAGTTCGGTGTGCATCGACCTCAAGGCGGAAGAAGGCAAGGCACAGCTACGCCAGCTGATCGGCCGCTGCGA
CGTGCTGGTGCACAACATCCGCATCAAGGCGATCGAGCGGCTGGGGTTCGGCTACGATTCGGTGGCGCAGATCAACCCGG
GCATCGTCTACTGCGCCGCCACCGACTTTGGCGAGGGCGGCGCCTTTGCCGGCCAGCCCGCATTCGACGACATCATCCAG
GGCGCCTGCGGCCTGGCCCATCTGGTGGGACACGAAAGCGGCGTCCCTGACTACCCGCCCACCCTGCTGGCCGACAAGAT
CGCGGGCCTGGCCACGGCCAACGCCATCCTGGGCGCGATCGTCCACAAGGTCCGCACCGGCGAAGGCCAGTACGTCGAAG
TGCCGATGTTCGAGACAATGGTCGCCTTCACGATGACGGAGCATCTGGGCGGCCACGGCTTTCAGCCGCCCATTGGCGAC
GCCGGCTATGCGCGCCTGCTCAAGGGCGGCCGCAAGCCCTCGCCCACCAAGGACGGGTACATCGCCCTGCTGCCCTATAC
GGAGCAGCACTGGAAGGCCTTCTTTCACCGCTTCGGGCGCGGCGAATTCATCGAACAGTTCAACATCAGCAGCCGGATCG
AGCGCAACAAGAACATCCAGGCGATCTATGCGGAGCTGCGCAACATCACCGCGCGGTACACCACAAAAGAGATGATGGAC
GTGTGCCGCGAGATGGATATCCCGGTCGCGGAAATGTATTCCATCCACACCATCCAGACCCATCCCCAGGTACAAAGCAC
CGGGCTGTTCCAGACCATGACGCACCCCACCGAAGGCGACGTGGTAACCACCCGCCCGACGGCCCTGTTCTCCAGGTCGC
CTGCTTCCATCTATAAGCCTGCCCCTCGTCTCGGCGAGGATACTGAGCGGGTCTTGGGTTCCAGGTCCGTGAAATGTTCG
AATTGA

Upstream 100 bases:

>100_bases
AAGTATCCATGTTTATCCTTACTTGCTTGCGAACAAGCAACACTATAGAGTGGATACAACGAATCTGCTCTAGGTAATAA
CGATGAGAAGCGAGGCAACC

Downstream 100 bases:

>100_bases
AGCCGAACCTGAAAAACACGGCCAAGCAGCCGCCCATTGATCCCAAAGTGGAGAAAGCGTCTAATCATCAAGAGAAGGGA
CCTGAAGTGACGAGGTCTGT

Product: acyl-CoA transferase/carnitine dehydratase

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MNASDMTNDQKKPDATAPRGPLAGIRVLDLTAVVLGPVATQVLADYGAEVIKVEPPEGDLMRANGVSRTPGMSSTFMNIN
RNKSSVCIDLKAEEGKAQLRQLIGRCDVLVHNIRIKAIERLGFGYDSVAQINPGIVYCAATDFGEGGAFAGQPAFDDIIQ
GACGLAHLVGHESGVPDYPPTLLADKIAGLATANAILGAIVHKVRTGEGQYVEVPMFETMVAFTMTEHLGGHGFQPPIGD
AGYARLLKGGRKPSPTKDGYIALLPYTEQHWKAFFHRFGRGEFIEQFNISSRIERNKNIQAIYAELRNITARYTTKEMMD
VCREMDIPVAEMYSIHTIQTHPQVQSTGLFQTMTHPTEGDVVTTRPTALFSRSPASIYKPAPRLGEDTERVLGSRSVKCS
N

Sequences:

>Translated_401_residues
MNASDMTNDQKKPDATAPRGPLAGIRVLDLTAVVLGPVATQVLADYGAEVIKVEPPEGDLMRANGVSRTPGMSSTFMNIN
RNKSSVCIDLKAEEGKAQLRQLIGRCDVLVHNIRIKAIERLGFGYDSVAQINPGIVYCAATDFGEGGAFAGQPAFDDIIQ
GACGLAHLVGHESGVPDYPPTLLADKIAGLATANAILGAIVHKVRTGEGQYVEVPMFETMVAFTMTEHLGGHGFQPPIGD
AGYARLLKGGRKPSPTKDGYIALLPYTEQHWKAFFHRFGRGEFIEQFNISSRIERNKNIQAIYAELRNITARYTTKEMMD
VCREMDIPVAEMYSIHTIQTHPQVQSTGLFQTMTHPTEGDVVTTRPTALFSRSPASIYKPAPRLGEDTERVLGSRSVKCS
N
>Mature_401_residues
MNASDMTNDQKKPDATAPRGPLAGIRVLDLTAVVLGPVATQVLADYGAEVIKVEPPEGDLMRANGVSRTPGMSSTFMNIN
RNKSSVCIDLKAEEGKAQLRQLIGRCDVLVHNIRIKAIERLGFGYDSVAQINPGIVYCAATDFGEGGAFAGQPAFDDIIQ
GACGLAHLVGHESGVPDYPPTLLADKIAGLATANAILGAIVHKVRTGEGQYVEVPMFETMVAFTMTEHLGGHGFQPPIGD
AGYARLLKGGRKPSPTKDGYIALLPYTEQHWKAFFHRFGRGEFIEQFNISSRIERNKNIQAIYAELRNITARYTTKEMMD
VCREMDIPVAEMYSIHTIQTHPQVQSTGLFQTMTHPTEGDVVTTRPTALFSRSPASIYKPAPRLGEDTERVLGSRSVKCS
N

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=395, Percent_Identity=28.8607594936709, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI300863124, Length=421, Percent_Identity=28.2660332541568, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI300863126, Length=391, Percent_Identity=26.5984654731458, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI13376042, Length=421, Percent_Identity=25.6532066508314, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI266456254, Length=383, Percent_Identity=27.4151436031332, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI42794625, Length=383, Percent_Identity=27.4151436031332, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI266458397, Length=198, Percent_Identity=32.3232323232323, Blast_Score=99, Evalue=9e-21,
Organism=Homo sapiens, GI266458393, Length=198, Percent_Identity=32.3232323232323, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI42822893, Length=129, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI266458395, Length=129, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=8e-14,
Organism=Escherichia coli, GI87082093, Length=358, Percent_Identity=31.2849162011173, Blast_Score=152, Evalue=5e-38,
Organism=Escherichia coli, GI1788717, Length=399, Percent_Identity=30.0751879699248, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1786222, Length=393, Percent_Identity=26.7175572519084, Blast_Score=94, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24648431, Length=380, Percent_Identity=30.7894736842105, Blast_Score=172, Evalue=4e-43,
Organism=Drosophila melanogaster, GI24585488, Length=369, Percent_Identity=26.2872628726287, Blast_Score=102, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 43619; Mature: 43619

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASDMTNDQKKPDATAPRGPLAGIRVLDLTAVVLGPVATQVLADYGAEVIKVEPPEGDL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCE
MRANGVSRTPGMSSTFMNINRNKSSVCIDLKAEEGKAQLRQLIGRCDVLVHNIRIKAIER
EECCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LGFGYDSVAQINPGIVYCAATDFGEGGAFAGQPAFDDIIQGACGLAHLVGHESGVPDYPP
HCCCCCCHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH
TLLADKIAGLATANAILGAIVHKVRTGEGQYVEVPMFETMVAFTMTEHLGGHGFQPPIGD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCC
AGYARLLKGGRKPSPTKDGYIALLPYTEQHWKAFFHRFGRGEFIEQFNISSRIERNKNIQ
HHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHCHHHHHHCCCCHH
AIYAELRNITARYTTKEMMDVCREMDIPVAEMYSIHTIQTHPQVQSTGLFQTMTHPTEGD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEECCCCCHHCCCCCCCCCCCCCC
VVTTRPTALFSRSPASIYKPAPRLGEDTERVLGSRSVKCSN
EEECCCHHHHCCCCHHHCCCCCCCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNASDMTNDQKKPDATAPRGPLAGIRVLDLTAVVLGPVATQVLADYGAEVIKVEPPEGDL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCE
MRANGVSRTPGMSSTFMNINRNKSSVCIDLKAEEGKAQLRQLIGRCDVLVHNIRIKAIER
EECCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LGFGYDSVAQINPGIVYCAATDFGEGGAFAGQPAFDDIIQGACGLAHLVGHESGVPDYPP
HCCCCCCHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH
TLLADKIAGLATANAILGAIVHKVRTGEGQYVEVPMFETMVAFTMTEHLGGHGFQPPIGD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCC
AGYARLLKGGRKPSPTKDGYIALLPYTEQHWKAFFHRFGRGEFIEQFNISSRIERNKNIQ
HHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHCHHHHHHCCCCHH
AIYAELRNITARYTTKEMMDVCREMDIPVAEMYSIHTIQTHPQVQSTGLFQTMTHPTEGD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEECCCCCHHCCCCCCCCCCCCCC
VVTTRPTALFSRSPASIYKPAPRLGEDTERVLGSRSVKCSN
EEECCCHHHHCCCCHHHCCCCCCCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA