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The map label for this gene is lumQ [H]

Identifier: 116696088

GI number: 116696088

Start: 2435352

End: 2436116

Strand: Direct

Name: lumQ [H]

Synonym: H16_B2152

Alternate gene names: 116696088

Gene position: 2435352-2436116 (Clockwise)

Preceding gene: 116696087

Following gene: 116696089

Centisome position: 83.62

GC content: 73.07

Gene sequence:

>765_bases
ATGCCGAAGCCCGCTGAACCCCAAGCCTCGCCGCTGGTCGAGCATCGGCGCTACCGCCCGCAGCCTGACGGCCACCAGCA
CGGCTACCACCAGTTGCTGTTCGGTCTGGCCGGCGCCACCGAGCTGGAGATCGACGGCCACGTCTATCGCGTGGACGACC
GCACCGGCCTGATCGTGCCGGCCGGCAGCCATCATGAATTCCTGGGCTTGGACGGCAACCTGCAGCTGGTGGCGGACTTC
CCGGCGCGCTCGGTGGCACTGCCCGCGCGGCTGATGACGCGCCCGCGCACGTTCCCGCTGGACGGCGCCTTCGGCAGCCG
CGTGCGCGCGCTGGCGGCATGGCGCGCCGCCGCAGCAGCACGCGGGCCGCAGACCGACTGGCACCTGGCGGCAACGCTGG
CCGCGGCGCTGGCGGACTGCCTCGGCATGCCCGGCGACGAGCAGGTATTCCCGCTGATGGCCGTTGATGCCTACCTGCGC
GCCAACCTGGCCGCGCCACTGCGCGTGGCGGAAGTCGCCGGGCATTTCGGCTGGAGCGTGCGGCGCTTCCAGACCCTGTT
TGCCGAGGCCTTCGGCGATACCCCGCACCGCTACCAGACCCGGCTGCGGCTGGACCGCGCGCTGCAGCTGCTGACGCAAT
CCACGCTGCCGCTGGCCGAGATCGCGCTGGCGTCAGGCTACCCGGACCAGACCACCTTCACGCGCAGCTTCACGCGGCGC
TTCGGGCAGCCGCCCGGGGCGTGGCGGGCGGCCGCACGCGGCTAG

Upstream 100 bases:

>100_bases
TGGCTGCTGTTCGGCGAACGGCTGGATGCGGTGCAGGCGCTGGGCATGGCGGTGGCCGGCGCGGGCGTCTGGCTGTGCCA
GACCCCTGGCAGGTTGCGGC

Downstream 100 bases:

>100_bases
CCTGCCTGCGCGGTAGTCGATTCTGGCACCGGACTAACCGTGGTGACCCTCTCGCGTCGAGGCGAGTTAGAGGGCGGCGC
AGGTTGAACGTGCGGCGTAT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MPKPAEPQASPLVEHRRYRPQPDGHQHGYHQLLFGLAGATELEIDGHVYRVDDRTGLIVPAGSHHEFLGLDGNLQLVADF
PARSVALPARLMTRPRTFPLDGAFGSRVRALAAWRAAAAARGPQTDWHLAATLAAALADCLGMPGDEQVFPLMAVDAYLR
ANLAAPLRVAEVAGHFGWSVRRFQTLFAEAFGDTPHRYQTRLRLDRALQLLTQSTLPLAEIALASGYPDQTTFTRSFTRR
FGQPPGAWRAAARG

Sequences:

>Translated_254_residues
MPKPAEPQASPLVEHRRYRPQPDGHQHGYHQLLFGLAGATELEIDGHVYRVDDRTGLIVPAGSHHEFLGLDGNLQLVADF
PARSVALPARLMTRPRTFPLDGAFGSRVRALAAWRAAAAARGPQTDWHLAATLAAALADCLGMPGDEQVFPLMAVDAYLR
ANLAAPLRVAEVAGHFGWSVRRFQTLFAEAFGDTPHRYQTRLRLDRALQLLTQSTLPLAEIALASGYPDQTTFTRSFTRR
FGQPPGAWRAAARG
>Mature_253_residues
PKPAEPQASPLVEHRRYRPQPDGHQHGYHQLLFGLAGATELEIDGHVYRVDDRTGLIVPAGSHHEFLGLDGNLQLVADFP
ARSVALPARLMTRPRTFPLDGAFGSRVRALAAWRAAAAARGPQTDWHLAATLAAALADCLGMPGDEQVFPLMAVDAYLRA
NLAAPLRVAEVAGHFGWSVRRFQTLFAEAFGDTPHRYQTRLRLDRALQLLTQSTLPLAEIALASGYPDQTTFTRSFTRRF
GQPPGAWRAAARG

Specific function: Probable transcriptional regulator. Its target gene(s) is not yet known [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 27816; Mature: 27685

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKPAEPQASPLVEHRRYRPQPDGHQHGYHQLLFGLAGATELEIDGHVYRVDDRTGLIVP
CCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEECCEEEEECCCCEEEEE
AGSHHEFLGLDGNLQLVADFPARSVALPARLMTRPRTFPLDGAFGSRVRALAAWRAAAAA
CCCCCCEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC
RGPQTDWHLAATLAAALADCLGMPGDEQVFPLMAVDAYLRANLAAPLRVAEVAGHFGWSV
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHH
RRFQTLFAEAFGDTPHRYQTRLRLDRALQLLTQSTLPLAEIALASGYPDQTTFTRSFTRR
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHH
FGQPPGAWRAAARG
HCCCCCHHHHCCCC
>Mature Secondary Structure 
PKPAEPQASPLVEHRRYRPQPDGHQHGYHQLLFGLAGATELEIDGHVYRVDDRTGLIVP
CCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEECCEEEEECCCCEEEEE
AGSHHEFLGLDGNLQLVADFPARSVALPARLMTRPRTFPLDGAFGSRVRALAAWRAAAAA
CCCCCCEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC
RGPQTDWHLAATLAAALADCLGMPGDEQVFPLMAVDAYLRANLAAPLRVAEVAGHFGWSV
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHH
RRFQTLFAEAFGDTPHRYQTRLRLDRALQLLTQSTLPLAEIALASGYPDQTTFTRSFTRR
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHH
FGQPPGAWRAAARG
HCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7503752 [H]