Click here to switch to the map view.

The map label for this gene is yeaW [H]

Identifier: 116696065

GI number: 116696065

Start: 2408303

End: 2409424

Strand: Direct

Name: yeaW [H]

Synonym: H16_B2129

Alternate gene names: 116696065

Gene position: 2408303-2409424 (Clockwise)

Preceding gene: 116696058

Following gene: 116696066

Centisome position: 82.69

GC content: 64.71

Gene sequence:

>1122_bases
ATGCAAGAGACCACCGCCCCCGCCTGCGGCACCACCCCGCCGCTGGCCTATACGCTGCCGGCCCACTACTACACCTCGCA
GGAAGTCTTCGAGCAGGAGAAGAAGACCATCTTCGCGCGCAGCTGGGTGTGTGTGATGCACAAGAGCCAGGTGGCCGAGA
ACAACCAGTACGCCACAGTGAAAGTGGCCGGCGAGAACGTGTTCGTAGTGCGCGGCCGCGACGGCGTGTTGCGCGCGTTC
TACAACGTCTGCCCGCACCGCGCCCATGAGCTGTTTGCGGATGGCGCGGGCAAGGCCAAGAACGTGATCACTTGCCCGTA
TCACGCCTGGTCGTTCGGCCTGGACGGCAAGCTGATCCACGTGCGCAACGCCGAGAACGTGCCGGGCTTCTGCAAGGACA
ACGCCGGCCTGACGCCGGTGCGCGTGGAAGAATTCTGCGGCCTGGTCTTCGTCAACCTGGACATGGACGCGAAACCGCTG
GCCGAGCTGGCAGGCGGCCTCAACGACGAGATCCGCGCGCGCTGCCCGGATGTCGACAAGCTGGTGCCCGCGCACAAGCT
CACCTACGAGATGAAGGCCAACTGGAAGGTGGTGGTCGACAACTACCTGGAATGCCTGCACTGCCAGACCGCGCACCCGG
CGCTGGTCGAGTCGATCAGGATGGAGACCTACAAGCACGAAGTGCGCGGCCTCTACACCAGCCAGGTCGGCCAGACGCGC
TCGGGCAGCGACGCCTTCACCTATGACAGCGACGCCCCCAACACCGACTTCGCCGCCTACTGGCTGTGGCCCAACGTGAC
GCTGAACGTGCTGCCGGGCGATGGCAACTACGGCGTGTTCTACATGTTCCCGGTGGATGCCGACACCACCATCCAGCACT
TCGAGTTCTACTTCCGCGACAGCACGCCCACGGCCGAGCAGGAGCAACTGATCGAGTACTACAAGAACGTGCTCAAGCCC
GAAGACCTGAGCATCGTCGAATCGGTGCAGCGCGGCCTGAAGTCGCGCGGCTACCGCAACGGGCAGGGCCCGCTACTGGT
CACCGACGACAAGACCTCCGCCATCGGCGAGCACGGCGTGCAGCACTTCCAGCAGATGGTGCTCGACGCCCTGGCCGCCT
GA

Upstream 100 bases:

>100_bases
CACCTGCGCTCCTCACTAGACTTCACTTCACATCACCAACAGTAATTTAATTAACTGTTAGTGAATCGATAAGGCAACGA
GACCAACAAGGAGACAACCC

Downstream 100 bases:

>100_bases
AACGAACCACCGAACCGGAACCGCAGCAATGATCCTGACCCAGCTCTATATCGACGGCCAGTGGCAGTCGCCCATCGACC
AAGGCACGCGCGCCATCCTG

Product: phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MQETTAPACGTTPPLAYTLPAHYYTSQEVFEQEKKTIFARSWVCVMHKSQVAENNQYATVKVAGENVFVVRGRDGVLRAF
YNVCPHRAHELFADGAGKAKNVITCPYHAWSFGLDGKLIHVRNAENVPGFCKDNAGLTPVRVEEFCGLVFVNLDMDAKPL
AELAGGLNDEIRARCPDVDKLVPAHKLTYEMKANWKVVVDNYLECLHCQTAHPALVESIRMETYKHEVRGLYTSQVGQTR
SGSDAFTYDSDAPNTDFAAYWLWPNVTLNVLPGDGNYGVFYMFPVDADTTIQHFEFYFRDSTPTAEQEQLIEYYKNVLKP
EDLSIVESVQRGLKSRGYRNGQGPLLVTDDKTSAIGEHGVQHFQQMVLDALAA

Sequences:

>Translated_373_residues
MQETTAPACGTTPPLAYTLPAHYYTSQEVFEQEKKTIFARSWVCVMHKSQVAENNQYATVKVAGENVFVVRGRDGVLRAF
YNVCPHRAHELFADGAGKAKNVITCPYHAWSFGLDGKLIHVRNAENVPGFCKDNAGLTPVRVEEFCGLVFVNLDMDAKPL
AELAGGLNDEIRARCPDVDKLVPAHKLTYEMKANWKVVVDNYLECLHCQTAHPALVESIRMETYKHEVRGLYTSQVGQTR
SGSDAFTYDSDAPNTDFAAYWLWPNVTLNVLPGDGNYGVFYMFPVDADTTIQHFEFYFRDSTPTAEQEQLIEYYKNVLKP
EDLSIVESVQRGLKSRGYRNGQGPLLVTDDKTSAIGEHGVQHFQQMVLDALAA
>Mature_373_residues
MQETTAPACGTTPPLAYTLPAHYYTSQEVFEQEKKTIFARSWVCVMHKSQVAENNQYATVKVAGENVFVVRGRDGVLRAF
YNVCPHRAHELFADGAGKAKNVITCPYHAWSFGLDGKLIHVRNAENVPGFCKDNAGLTPVRVEEFCGLVFVNLDMDAKPL
AELAGGLNDEIRARCPDVDKLVPAHKLTYEMKANWKVVVDNYLECLHCQTAHPALVESIRMETYKHEVRGLYTSQVGQTR
SGSDAFTYDSDAPNTDFAAYWLWPNVTLNVLPGDGNYGVFYMFPVDADTTIQHFEFYFRDSTPTAEQEQLIEYYKNVLKP
EDLSIVESVQRGLKSRGYRNGQGPLLVTDDKTSAIGEHGVQHFQQMVLDALAA

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=356, Percent_Identity=49.1573033707865, Blast_Score=374, Evalue=1e-105,
Organism=Escherichia coli, GI1788888, Length=147, Percent_Identity=35.3741496598639, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 41761; Mature: 41761

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQETTAPACGTTPPLAYTLPAHYYTSQEVFEQEKKTIFARSWVCVMHKSQVAENNQYATV
CCCCCCCCCCCCCCEEEECCCHHCCCHHHHHHHHHHHHHHHHEEEHHHHHHCCCCCEEEE
KVAGENVFVVRGRDGVLRAFYNVCPHRAHELFADGAGKAKNVITCPYHAWSFGLDGKLIH
EEECCEEEEEECCCHHHHHHHHHCCHHHHHHHHCCCCCCCCEEECCCHHEEECCCCEEEE
VRNAENVPGFCKDNAGLTPVRVEEFCGLVFVNLDMDAKPLAELAGGLNDEIRARCPDVDK
EECCCCCCCCCCCCCCCCCEEHHHHCCEEEEEECCCCHHHHHHHCCCCHHHHHCCCCHHH
LVPAHKLTYEMKANWKVVVDNYLECLHCQTAHPALVESIRMETYKHEVRGLYTSQVGQTR
HCCHHHEEEEECCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SGSDAFTYDSDAPNTDFAAYWLWPNVTLNVLPGDGNYGVFYMFPVDADTTIQHFEFYFRD
CCCCCEEECCCCCCCCEEEEEEECCCEEEEEECCCCEEEEEEEECCCCCCEEEEEEEEEC
STPTAEQEQLIEYYKNVLKPEDLSIVESVQRGLKSRGYRNGQGPLLVTDDKTSAIGEHGV
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHH
QHFQQMVLDALAA
HHHHHHHHHHHCC
>Mature Secondary Structure
MQETTAPACGTTPPLAYTLPAHYYTSQEVFEQEKKTIFARSWVCVMHKSQVAENNQYATV
CCCCCCCCCCCCCCEEEECCCHHCCCHHHHHHHHHHHHHHHHEEEHHHHHHCCCCCEEEE
KVAGENVFVVRGRDGVLRAFYNVCPHRAHELFADGAGKAKNVITCPYHAWSFGLDGKLIH
EEECCEEEEEECCCHHHHHHHHHCCHHHHHHHHCCCCCCCCEEECCCHHEEECCCCEEEE
VRNAENVPGFCKDNAGLTPVRVEEFCGLVFVNLDMDAKPLAELAGGLNDEIRARCPDVDK
EECCCCCCCCCCCCCCCCCEEHHHHCCEEEEEECCCCHHHHHHHCCCCHHHHHCCCCHHH
LVPAHKLTYEMKANWKVVVDNYLECLHCQTAHPALVESIRMETYKHEVRGLYTSQVGQTR
HCCHHHEEEEECCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SGSDAFTYDSDAPNTDFAAYWLWPNVTLNVLPGDGNYGVFYMFPVDADTTIQHFEFYFRD
CCCCCEEECCCCCCCCEEEEEEECCCEEEEEECCCCEEEEEEEECCCCCCEEEEEEEEEC
STPTAEQEQLIEYYKNVLKPEDLSIVESVQRGLKSRGYRNGQGPLLVTDDKTSAIGEHGV
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHH
QHFQQMVLDALAA
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]