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The map label for this gene is fnr5 [H]

Identifier: 116696010

GI number: 116696010

Start: 2334806

End: 2335585

Strand: Direct

Name: fnr5 [H]

Synonym: H16_B2074

Alternate gene names: 116696010

Gene position: 2334806-2335585 (Clockwise)

Preceding gene: 116696008

Following gene: 116696015

Centisome position: 80.17

GC content: 70.0

Gene sequence:

>780_bases
ATGCCGGACAGCGGCGCCCCAGCCTGCCTGCTCTGCCTCTTTCGCCACGTTTGCCACAATGCCGGGCCACAAGCCCCCCT
GCCGCACGCGCCGATGGCGCTGCAGCCGGAGCTGGTAGAGGTGCGCACCGGCGAGCATGTGTTTCGCCAGGGCCGCCCTG
CGCTGACGGTCTACCCGCTGCGCCATGGCAGCGCCAAGCAGGTCTATGAATCGCCGCTGGGCTGGCGGCAGGTAACGGGT
TTTTCGCTGCCCGGCGACGTGCTGGGGCTTGAGCCGCACGAAGGTCCGGTCTATGGGACTGGTGCAATCGCGCTGCAGGA
TGCAATGGTTTGTGCGGTCTCGGTCGAATCCCTGCGCACCCTCATGCAGGCCGCCCCATTCCGTGAAACGGTGCTGGAAG
CGATGCGCCGCAACGCCGAGCGCGAACGCGTGCTGCTGGTGGCGGTGGGGTCGATGAGGGCGCCACAGCGCCTGGCGATG
CTGCTGCTCGACCTCGCCGGCGAGCAGGCGCGCCGCGACGGCAACCGCGACGGCGCGCTGACGCTGGCGATGTCGCGCAC
GGACATCGCCAGCCTGCTTGGGCTAACCCTGGAAACGGTGTCGCGGCTGCTGTCGCGCTTTGCCTCGGTCGGGCTGATCT
CGGTGCGCCAGCGGCACCTGCGCATCATCGACCGCGACGGGCTGGCCGCGGTCTATGCCGACCTGGATCCGGCCCCGCGC
CAGGCGGCGGCCAGATCAGAAGCCTACGGCGGGGAGTTCGGCGAACCCCGGCTGGCCTAG

Upstream 100 bases:

>100_bases
ATTTTTAAACCAGCCATACGAAAGAATGCAGATCGCAGCGAGATGGCTTGCGTTGCCGGCGTTTTATACTTGGCCATCGT
CACCGGAGGACAATGACACC

Downstream 100 bases:

>100_bases
ACGGCTGGCCGGGGCGCAGGGGCCAAGGGCTCAGCGGTCCGCCACGCGCTGCCAGCCGGCAGGCGAAAAACTGCGGATGG
CCTTGGCGCGCGATGCGGTG

Product: transcriptional regulator, FNR-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MPDSGAPACLLCLFRHVCHNAGPQAPLPHAPMALQPELVEVRTGEHVFRQGRPALTVYPLRHGSAKQVYESPLGWRQVTG
FSLPGDVLGLEPHEGPVYGTGAIALQDAMVCAVSVESLRTLMQAAPFRETVLEAMRRNAERERVLLVAVGSMRAPQRLAM
LLLDLAGEQARRDGNRDGALTLAMSRTDIASLLGLTLETVSRLLSRFASVGLISVRQRHLRIIDRDGLAAVYADLDPAPR
QAAARSEAYGGEFGEPRLA

Sequences:

>Translated_259_residues
MPDSGAPACLLCLFRHVCHNAGPQAPLPHAPMALQPELVEVRTGEHVFRQGRPALTVYPLRHGSAKQVYESPLGWRQVTG
FSLPGDVLGLEPHEGPVYGTGAIALQDAMVCAVSVESLRTLMQAAPFRETVLEAMRRNAERERVLLVAVGSMRAPQRLAM
LLLDLAGEQARRDGNRDGALTLAMSRTDIASLLGLTLETVSRLLSRFASVGLISVRQRHLRIIDRDGLAAVYADLDPAPR
QAAARSEAYGGEFGEPRLA
>Mature_258_residues
PDSGAPACLLCLFRHVCHNAGPQAPLPHAPMALQPELVEVRTGEHVFRQGRPALTVYPLRHGSAKQVYESPLGWRQVTGF
SLPGDVLGLEPHEGPVYGTGAIALQDAMVCAVSVESLRTLMQAAPFRETVLEAMRRNAERERVLLVAVGSMRAPQRLAML
LLDLAGEQARRDGNRDGALTLAMSRTDIASLLGLTLETVSRLLSRFASVGLISVRQRHLRIIDRDGLAAVYADLDPAPRQ
AAARSEAYGGEFGEPRLA

Specific function: May regulate gene expression in response to changes in oxygen levels or to changes in the redox potential of the bacterial environment [H]

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787595, Length=192, Percent_Identity=30.7291666666667, Blast_Score=101, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR000595
- InterPro:   IPR001808
- InterPro:   IPR012318
- InterPro:   IPR014710
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00325 Crp [H]

EC number: NA

Molecular weight: Translated: 28027; Mature: 27896

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: PS00042 HTH_CRP_1 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDSGAPACLLCLFRHVCHNAGPQAPLPHAPMALQPELVEVRTGEHVFRQGRPALTVYPL
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHEECCCHHHHHCCCCCEEEEEC
RHGSAKQVYESPLGWRQVTGFSLPGDVLGLEPHEGPVYGTGAIALQDAMVCAVSVESLRT
CCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHH
LMQAAPFRETVLEAMRRNAERERVLLVAVGSMRAPQRLAMLLLDLAGEQARRDGNRDGAL
HHHHCCHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
TLAMSRTDIASLLGLTLETVSRLLSRFASVGLISVRQRHLRIIDRDGLAAVYADLDPAPR
EEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCEEEEECCCCCHH
QAAARSEAYGGEFGEPRLA
HHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PDSGAPACLLCLFRHVCHNAGPQAPLPHAPMALQPELVEVRTGEHVFRQGRPALTVYPL
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHEECCCHHHHHCCCCCEEEEEC
RHGSAKQVYESPLGWRQVTGFSLPGDVLGLEPHEGPVYGTGAIALQDAMVCAVSVESLRT
CCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHH
LMQAAPFRETVLEAMRRNAERERVLLVAVGSMRAPQRLAMLLLDLAGEQARRDGNRDGAL
HHHHCCHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
TLAMSRTDIASLLGLTLETVSRLLSRFASVGLISVRQRHLRIIDRDGLAAVYADLDPAPR
EEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCEEEEECCCCCHH
QAAARSEAYGGEFGEPRLA
HHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7693656; 12910271 [H]