Click here to switch to the map view.

The map label for this gene is soj [H]

Identifier: 116695968

GI number: 116695968

Start: 2284268

End: 2285035

Strand: Direct

Name: soj [H]

Synonym: H16_B2032

Alternate gene names: 116695968

Gene position: 2284268-2285035 (Clockwise)

Preceding gene: 116695962

Following gene: 116695970

Centisome position: 78.43

GC content: 60.03

Gene sequence:

>768_bases
ATGCGGCGCGTCGTGTTCAATCAGAAGGGTGGGGTCGGAAAATCGACCATTGTGTGCAATCTCGCGGCGATCAGCGCCAG
CGAGGGCTTGCGCACCCTGGTCATTGACCTGGATGCACAAGGCAACTCCACCCAGTACCTGCTTGGCGCGCGGGCCGCGG
AGGCAAGTCCGACCGCGGCGAATTTCTTCGAGACCTCCCTGACCTACAACTTCAGGCCGGTGGAATTTACGTCCTTTGTC
CACCCGACGCCGTTCGAGAACCTCGATGTGATGCCGGCGCATCCTGACCTGGATTCCCTCCACGGCAAGCTCGAATCCCG
CTACAAGATCTACAAGCTACGCGACGCCCTGCTCGAGCTGGAGGCAGTCTATGACGCCATTTACATCGACACGCCACCGG
CCCTGAATTTTTATACCCGCTCCGCACTGATCGCCGTGGAGCGCTGCCTGATCCCGTTCGATTGCGATGACTTCTCGCGC
CGTGCCCTCTACACGCTGCTCGATAACGTGAAGGAAATCCAACAGGACCACAACGACGGGCTGCAGGTCGAGGGGATCGT
GATCAACCAGTTCCAGCCGCGAGCCAGCTTGCCGCAGAAGCTGGTCGACGAACTGGTAAGCGAGGGCCTGCCAGTACTTG
AATCGCGGCTATCTGCATCGGTGAAGATCCGCGAATCGCATCAGCATGCCACCCCCATGATCCATCTGGATCCGCGCCAC
AAGCTGGCGCAGGAATATGTGGCGTTGCACCGCGAGCTGGCTGGTTGA

Upstream 100 bases:

>100_bases
ACGGCCTGGAATATCGTTGTCATAGCCGGGCGGGGTGCTGCCGGGAACCTCACGCTGAGGTATGCTGCCGCTTTCGGATC
GATTCTCTCCAGAGGGGCAA

Downstream 100 bases:

>100_bases
GGAATCGCCAAGGCGCGCTGAGATCGATTTCCCCACGCAATGACACTGCCGGGCGTCAGCTTCCTCGCGGCCGGTCAGAA
CCGATGCCGCATCCCCGTGG

Product: chromosome partitioning ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MRRVVFNQKGGVGKSTIVCNLAAISASEGLRTLVIDLDAQGNSTQYLLGARAAEASPTAANFFETSLTYNFRPVEFTSFV
HPTPFENLDVMPAHPDLDSLHGKLESRYKIYKLRDALLELEAVYDAIYIDTPPALNFYTRSALIAVERCLIPFDCDDFSR
RALYTLLDNVKEIQQDHNDGLQVEGIVINQFQPRASLPQKLVDELVSEGLPVLESRLSASVKIRESHQHATPMIHLDPRH
KLAQEYVALHRELAG

Sequences:

>Translated_255_residues
MRRVVFNQKGGVGKSTIVCNLAAISASEGLRTLVIDLDAQGNSTQYLLGARAAEASPTAANFFETSLTYNFRPVEFTSFV
HPTPFENLDVMPAHPDLDSLHGKLESRYKIYKLRDALLELEAVYDAIYIDTPPALNFYTRSALIAVERCLIPFDCDDFSR
RALYTLLDNVKEIQQDHNDGLQVEGIVINQFQPRASLPQKLVDELVSEGLPVLESRLSASVKIRESHQHATPMIHLDPRH
KLAQEYVALHRELAG
>Mature_255_residues
MRRVVFNQKGGVGKSTIVCNLAAISASEGLRTLVIDLDAQGNSTQYLLGARAAEASPTAANFFETSLTYNFRPVEFTSFV
HPTPFENLDVMPAHPDLDSLHGKLESRYKIYKLRDALLELEAVYDAIYIDTPPALNFYTRSALIAVERCLIPFDCDDFSR
RALYTLLDNVKEIQQDHNDGLQVEGIVINQFQPRASLPQKLVDELVSEGLPVLESRLSASVKIRESHQHATPMIHLDPRH
KLAQEYVALHRELAG

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28546; Mature: 28546

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVVFNQKGGVGKSTIVCNLAAISASEGLRTLVIDLDAQGNSTQYLLGARAAEASPTAA
CCCEEECCCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCHH
NFFETSLTYNFRPVEFTSFVHPTPFENLDVMPAHPDLDSLHGKLESRYKIYKLRDALLEL
HHHHHHEEEECCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EAVYDAIYIDTPPALNFYTRSALIAVERCLIPFDCDDFSRRALYTLLDNVKEIQQDHNDG
HHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
LQVEGIVINQFQPRASLPQKLVDELVSEGLPVLESRLSASVKIRESHQHATPMIHLDPRH
CEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHCCEEEEECCCCCCCCEEEECHHH
KLAQEYVALHRELAG
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MRRVVFNQKGGVGKSTIVCNLAAISASEGLRTLVIDLDAQGNSTQYLLGARAAEASPTAA
CCCEEECCCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCHH
NFFETSLTYNFRPVEFTSFVHPTPFENLDVMPAHPDLDSLHGKLESRYKIYKLRDALLEL
HHHHHHEEEECCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EAVYDAIYIDTPPALNFYTRSALIAVERCLIPFDCDDFSRRALYTLLDNVKEIQQDHNDG
HHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
LQVEGIVINQFQPRASLPQKLVDELVSEGLPVLESRLSASVKIRESHQHATPMIHLDPRH
CEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHCCEEEEECCCCCCCCEEEECHHH
KLAQEYVALHRELAG
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]