| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116695935
Identifier: 116695935
GI number: 116695935
Start: 2257208
End: 2258197
Strand: Direct
Name: 116695935
Synonym: H16_B1999
Alternate gene names: NA
Gene position: 2257208-2258197 (Clockwise)
Preceding gene: 116695933
Following gene: 116695936
Centisome position: 77.5
GC content: 64.65
Gene sequence:
>990_bases ATGCAAGTGAGTCCCAAGCGCCCCCATCTCGCAGGTGCAGCAGCCCTGTTTGTCACCCTCTTCCTCAGTGGTTTGCCTGC TGCCCACGCGGCCGGCTATCCGGATCGTCCCATTACGCTGGTGGTGCCATTCGGCGCCGGCGGCATCACTGACCTGGTGG CACGCGCCACCGGCAAGGCCCTGTCTGAACAGCTTGGCCAGTCGATCGTCGTGGAAAACCGCCCCGGCGCGGGCGGCAAC ATCGCGGCAGATTTCGTACGTCGTGCCCGGCCCGATGGCTACACACTGATGTTTGCCACCGTGGGCGTCCTTGCGGTCAA TCCGCATACGGACGTCAAGGTCAGCTTTGATAGCGCGAAGGACTTCACCTATATCTCGCTCGTCGGTTCCACGCCCCATC TGGTGGTGGTCGGCGCCGACGTCCCGGCCAGGACGCTGCCCGAACTGATCAAGCTCGCGCAACGCCAGCCCGGCGCCGTC AGCGTAGGCACCGCAGGCGTCGGCAGCTCGCCGTACCAGGGCATGCGCGTGCTGCAGGACGCGGCCCGGGCCGAATTCCT GCACGTACCGTTCAAGAGCGGCGCTGAATCGGTGACCAACGTTGTCTCGGGGCAGGTCAACATGACATTCGAGGCCACGC CGCAGGTGATGCCATTCGTCGCCTCCGGCAAGCTGCGGGCGTTGGCCGTTGCCAATCCGCGGCGGCTGGCCACCGCGCCG GACGTGCCGGCGACACCGGAACTGGGCCTGCCGACCATCGTGTCCGGTTCGGTGGCAGGCCTGATTGCGCCTGCCGGCCT TGATGCCGCCATCGTGAAGAAGCTCAACACAGCCATTGCCGGCGTGGTATCGAACCCCAAGTTCAAGGCCACGCTGATGG CACAGGGCACTGAACCGATGTCATCGTCGCCCGAACAATTCCGCAAGCTGATCAAAGAAGAAGACCAGCGCTGGTCGGCC TTGCTCAAGGCTGACAACAAGACCAGGTAA
Upstream 100 bases:
>100_bases ATTGTAAGGTCGGCACGACACATCGGCAACTCGGTTTGCCTAAATGACACTTCGGTGTCATTATAGACACACTTGTTTCC CCACCCGCCCCCGAAGGAGC
Downstream 100 bases:
>100_bases CGCGGACTGAAAGCTCCCCTTCTCCAGCACAACGAAAGGAAAATCCCATGGCCAGCACCATGCAACTGAGCAAGAGCGAA ATCGTCGCCGCCTCGCTCCA
Product: extra-cytoplasmic solute receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MQVSPKRPHLAGAAALFVTLFLSGLPAAHAAGYPDRPITLVVPFGAGGITDLVARATGKALSEQLGQSIVVENRPGAGGN IAADFVRRARPDGYTLMFATVGVLAVNPHTDVKVSFDSAKDFTYISLVGSTPHLVVVGADVPARTLPELIKLAQRQPGAV SVGTAGVGSSPYQGMRVLQDAARAEFLHVPFKSGAESVTNVVSGQVNMTFEATPQVMPFVASGKLRALAVANPRRLATAP DVPATPELGLPTIVSGSVAGLIAPAGLDAAIVKKLNTAIAGVVSNPKFKATLMAQGTEPMSSSPEQFRKLIKEEDQRWSA LLKADNKTR
Sequences:
>Translated_329_residues MQVSPKRPHLAGAAALFVTLFLSGLPAAHAAGYPDRPITLVVPFGAGGITDLVARATGKALSEQLGQSIVVENRPGAGGN IAADFVRRARPDGYTLMFATVGVLAVNPHTDVKVSFDSAKDFTYISLVGSTPHLVVVGADVPARTLPELIKLAQRQPGAV SVGTAGVGSSPYQGMRVLQDAARAEFLHVPFKSGAESVTNVVSGQVNMTFEATPQVMPFVASGKLRALAVANPRRLATAP DVPATPELGLPTIVSGSVAGLIAPAGLDAAIVKKLNTAIAGVVSNPKFKATLMAQGTEPMSSSPEQFRKLIKEEDQRWSA LLKADNKTR >Mature_329_residues MQVSPKRPHLAGAAALFVTLFLSGLPAAHAAGYPDRPITLVVPFGAGGITDLVARATGKALSEQLGQSIVVENRPGAGGN IAADFVRRARPDGYTLMFATVGVLAVNPHTDVKVSFDSAKDFTYISLVGSTPHLVVVGADVPARTLPELIKLAQRQPGAV SVGTAGVGSSPYQGMRVLQDAARAEFLHVPFKSGAESVTNVVSGQVNMTFEATPQVMPFVASGKLRALAVANPRRLATAP DVPATPELGLPTIVSGSVAGLIAPAGLDAAIVKKLNTAIAGVVSNPKFKATLMAQGTEPMSSSPEQFRKLIKEEDQRWSA LLKADNKTR
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34201; Mature: 34201
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVSPKRPHLAGAAALFVTLFLSGLPAAHAAGYPDRPITLVVPFGAGGITDLVARATGKA CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHH LSEQLGQSIVVENRPGAGGNIAADFVRRARPDGYTLMFATVGVLAVNPHTDVKVSFDSAK HHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCEEEEECCCC DFTYISLVGSTPHLVVVGADVPARTLPELIKLAQRQPGAVSVGTAGVGSSPYQGMRVLQD CEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHH AARAEFLHVPFKSGAESVTNVVSGQVNMTFEATPQVMPFVASGKLRALAVANPRRLATAP HHHHEEEECCCCCCHHHHHHHHCCCEEEEEECCCCEECEECCCCEEEEEECCCHHCCCCC DVPATPELGLPTIVSGSVAGLIAPAGLDAAIVKKLNTAIAGVVSNPKFKATLMAQGTEPM CCCCCCCCCCCCEECCCHHHEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC SSSPEQFRKLIKEEDQRWSALLKADNKTR CCCHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQVSPKRPHLAGAAALFVTLFLSGLPAAHAAGYPDRPITLVVPFGAGGITDLVARATGKA CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHH LSEQLGQSIVVENRPGAGGNIAADFVRRARPDGYTLMFATVGVLAVNPHTDVKVSFDSAK HHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCEEEEECCCC DFTYISLVGSTPHLVVVGADVPARTLPELIKLAQRQPGAVSVGTAGVGSSPYQGMRVLQD CEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHH AARAEFLHVPFKSGAESVTNVVSGQVNMTFEATPQVMPFVASGKLRALAVANPRRLATAP HHHHEEEECCCCCCHHHHHHHHCCCEEEEEECCCCEECEECCCCEEEEEECCCHHCCCCC DVPATPELGLPTIVSGSVAGLIAPAGLDAAIVKKLNTAIAGVVSNPKFKATLMAQGTEPM CCCCCCCCCCCCEECCCHHHEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC SSSPEQFRKLIKEEDQRWSALLKADNKTR CCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]