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The map label for this gene is glxA [H]

Identifier: 116695919

GI number: 116695919

Start: 2243837

End: 2244772

Strand: Direct

Name: glxA [H]

Synonym: H16_B1983

Alternate gene names: 116695919

Gene position: 2243837-2244772 (Clockwise)

Preceding gene: 116695917

Following gene: 116695920

Centisome position: 77.04

GC content: 66.45

Gene sequence:

>936_bases
ATGAGCCTGCTTGATCTCACCGGACCGCAAACCGTGTTCTGGGCTGCCTCCCGGTTTGCACGCGAACGCGGCTTCGCCGG
CTACCGGAGCTATCTGGCAAGCGAGCACGGCGGCCTGGTTGCCTCGGCCGAAGGCACCGCCGTGCAGGCCATGGCGCTCT
CGGAAATCGATCTGCAGCACATCGATACGATCATCCTCCCGGGTGCCCCCGAGATGGTCAGGGTGCTCGACAGCGCCACC
TCGCTGGTCGCCTGGCTGCAGCAGGCCGCCGGACAGGTACGCCGCGTTGCCTCGGTCTGCAGCGGGGCCTTCCTGCTTGC
GCAAGCGGGCTTGCTTGACGGCAGGCGCGCTGCCACTCACTGGGCGATGCATGCGCAGTTCCGCGCGCGCTTTGCCGCGG
TCGAACTGGACCGGGACGCCATTTTCGTCCGCCAGGACCGCATCTGGACCTCGGCCGGCGTGACCACCGGCATCGACATG
GCGCTTGCGCTGGTCGAGGACGACTATGGCCACGATATCTCGCTGAGCGCGGCCAGGGAGCTGGCGGTCTTCATCAAGCG
GCCGGGCACGCAGCCACAGATCAGCGAGATCCTGCTGGCGCAGAGCCGGCACGTGCCGCTGTTCGAGGCGCTCCATCTAT
GGATCATCGAAAACCTGTCGCGGGAAGGGCTGTCAGTGGAACAGCTCGCCGAACAGGTCGGAATGAGCCCCCGCAACTTT
GCCCGGGTCTACAAGCAAAAGACCGGGCGCACCCCGGCCAAGGGGGTTGAGCATTTCCGGCTGGAAGCCGCACGCCGGCT
GCTCCAGGACCTGCATCTGCCGGTGGAGCAGATCGCAAGGCAGTGCGGCTTCGGCAGCGAGGAACGGATGCGCCTTACGT
TCCAGCGCAACCTGGGCTTCTCGCCCAGCGAGTATCGGTCGAAGGTGACCGGCTGA

Upstream 100 bases:

>100_bases
GACTTTCAAGATCCCTGCCATGGTTCCCTCTCCGCCTGCGCCCTCTTCCCGGACACTTGACGACCAGCCACGCAATCTTC
TGTTCGTGGCCTTCCCGGAC

Downstream 100 bases:

>100_bases
GAAAACGCCACAACCCGGCCGCACCATTGGTGCCGAACGGGAAACACCATGCGTCCGCCGCCGGCGCTACCGTCACTGCA
CCCCTTCGCCTAGCATGGGA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MSLLDLTGPQTVFWAASRFARERGFAGYRSYLASEHGGLVASAEGTAVQAMALSEIDLQHIDTIILPGAPEMVRVLDSAT
SLVAWLQQAAGQVRRVASVCSGAFLLAQAGLLDGRRAATHWAMHAQFRARFAAVELDRDAIFVRQDRIWTSAGVTTGIDM
ALALVEDDYGHDISLSAARELAVFIKRPGTQPQISEILLAQSRHVPLFEALHLWIIENLSREGLSVEQLAEQVGMSPRNF
ARVYKQKTGRTPAKGVEHFRLEAARRLLQDLHLPVEQIARQCGFGSEERMRLTFQRNLGFSPSEYRSKVTG

Sequences:

>Translated_311_residues
MSLLDLTGPQTVFWAASRFARERGFAGYRSYLASEHGGLVASAEGTAVQAMALSEIDLQHIDTIILPGAPEMVRVLDSAT
SLVAWLQQAAGQVRRVASVCSGAFLLAQAGLLDGRRAATHWAMHAQFRARFAAVELDRDAIFVRQDRIWTSAGVTTGIDM
ALALVEDDYGHDISLSAARELAVFIKRPGTQPQISEILLAQSRHVPLFEALHLWIIENLSREGLSVEQLAEQVGMSPRNF
ARVYKQKTGRTPAKGVEHFRLEAARRLLQDLHLPVEQIARQCGFGSEERMRLTFQRNLGFSPSEYRSKVTG
>Mature_310_residues
SLLDLTGPQTVFWAASRFARERGFAGYRSYLASEHGGLVASAEGTAVQAMALSEIDLQHIDTIILPGAPEMVRVLDSATS
LVAWLQQAAGQVRRVASVCSGAFLLAQAGLLDGRRAATHWAMHAQFRARFAAVELDRDAIFVRQDRIWTSAGVTTGIDMA
LALVEDDYGHDISLSAARELAVFIKRPGTQPQISEILLAQSRHVPLFEALHLWIIENLSREGLSVEQLAEQVGMSPRNFA
RVYKQKTGRTPAKGVEHFRLEAARRLLQDLHLPVEQIARQCGFGSEERMRLTFQRNLGFSPSEYRSKVTG

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 34366; Mature: 34235

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLDLTGPQTVFWAASRFARERGFAGYRSYLASEHGGLVASAEGTAVQAMALSEIDLQH
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCCEEHHHHHHHHHHHH
IDTIILPGAPEMVRVLDSATSLVAWLQQAAGQVRRVASVCSGAFLLAQAGLLDGRRAATH
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
WAMHAQFRARFAAVELDRDAIFVRQDRIWTSAGVTTGIDMALALVEDDYGHDISLSAARE
HHHHHHHHHHHHHEEECCCEEEEEECCEEECCCCHHHHHHHHHHHCCCCCCCEEHHHHHH
LAVFIKRPGTQPQISEILLAQSRHVPLFEALHLWIIENLSREGLSVEQLAEQVGMSPRNF
HHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHH
ARVYKQKTGRTPAKGVEHFRLEAARRLLQDLHLPVEQIARQCGFGSEERMRLTFQRNLGF
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHEEEEEECCCCC
SPSEYRSKVTG
CHHHHHHHCCC
>Mature Secondary Structure 
SLLDLTGPQTVFWAASRFARERGFAGYRSYLASEHGGLVASAEGTAVQAMALSEIDLQH
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCCEEHHHHHHHHHHHH
IDTIILPGAPEMVRVLDSATSLVAWLQQAAGQVRRVASVCSGAFLLAQAGLLDGRRAATH
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
WAMHAQFRARFAAVELDRDAIFVRQDRIWTSAGVTTGIDMALALVEDDYGHDISLSAARE
HHHHHHHHHHHHHEEECCCEEEEEECCEEECCCCHHHHHHHHHHHCCCCCCCEEHHHHHH
LAVFIKRPGTQPQISEILLAQSRHVPLFEALHLWIIENLSREGLSVEQLAEQVGMSPRNF
HHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHH
ARVYKQKTGRTPAKGVEHFRLEAARRLLQDLHLPVEQIARQCGFGSEERMRLTFQRNLGF
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHEEEEEECCCCC
SPSEYRSKVTG
CHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]