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The map label for this gene is paiB [H]

Identifier: 116695914

GI number: 116695914

Start: 2236369

End: 2236992

Strand: Direct

Name: paiB [H]

Synonym: H16_B1978

Alternate gene names: 116695914

Gene position: 2236369-2236992 (Clockwise)

Preceding gene: 116695912

Following gene: 116695915

Centisome position: 76.79

GC content: 65.87

Gene sequence:

>624_bases
ATGTATATTCCTGCTCACTTTGCTGAAAACCGGCCAGAGGAACTGGGCCGCATCATCCGCGAGCACCCGCTGGGGATGCT
GGTTACGCAAGGCAGCGCCGGACTGGATGCCGACCACATCCCGTTCGAGTTCGATCCCGGCGAGGGAACCCACGGCGTGC
TCACAGCCCACGTGGCCCGCGCGAACCCGCTCTGGCAGCGTTGCCCCACCGGCTCGCCGGTCATGGTCGTGTTCCGGGGC
GCCGAGGCCTATATCTCGCCCAACTGGTACCCGAGCAAGCATGAGGCGCACCGCCAGGTGCCGACCTGGAACTACGAGGT
GGTGCACGCGCACGGCACGATCACCGTGCATGACGACGAGCGTTTTGTTCGCCGCCTGGTTGCGCGCCTGACACGGCGGC
ACGAGGCAGCCGAACCCAGGCCCTGGAAGATGGGGGACTCCGCGCCGGAGTACATCGACAGCATGCTGCGCAACATCGTG
GGCATCGAGATCGCCGTCACTTCGCTGGTGGGCAAGGTCAAGGTCAGCCAGAACAGGGAGTTGCGGGATCGCCTCGGTGC
CGCCGACACCCTGGAGGCGCGGGGGTATGGCGAACTTGCGCAGTCCATGCGCAAGGCTGGTTGA

Upstream 100 bases:

>100_bases
TGGCGTGACTGGCCCATAAAGAATCATGAAAACCGGACCTTCCGATTGTGCCAGTTGTCGGCGACAGTATCGAGCATTCC
ATCGCTTCCGATTCCCCACC

Downstream 100 bases:

>100_bases
ATTGCCCCCGGGCCCGCGCTCAGCTTTTCCTCACCATTGACGAATACCCCGCCATGTCATTCATCCCCTTCCTGATCGCA
GCCATCGTTCTCGCCATCAC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MYIPAHFAENRPEELGRIIREHPLGMLVTQGSAGLDADHIPFEFDPGEGTHGVLTAHVARANPLWQRCPTGSPVMVVFRG
AEAYISPNWYPSKHEAHRQVPTWNYEVVHAHGTITVHDDERFVRRLVARLTRRHEAAEPRPWKMGDSAPEYIDSMLRNIV
GIEIAVTSLVGKVKVSQNRELRDRLGAADTLEARGYGELAQSMRKAG

Sequences:

>Translated_207_residues
MYIPAHFAENRPEELGRIIREHPLGMLVTQGSAGLDADHIPFEFDPGEGTHGVLTAHVARANPLWQRCPTGSPVMVVFRG
AEAYISPNWYPSKHEAHRQVPTWNYEVVHAHGTITVHDDERFVRRLVARLTRRHEAAEPRPWKMGDSAPEYIDSMLRNIV
GIEIAVTSLVGKVKVSQNRELRDRLGAADTLEARGYGELAQSMRKAG
>Mature_207_residues
MYIPAHFAENRPEELGRIIREHPLGMLVTQGSAGLDADHIPFEFDPGEGTHGVLTAHVARANPLWQRCPTGSPVMVVFRG
AEAYISPNWYPSKHEAHRQVPTWNYEVVHAHGTITVHDDERFVRRLVARLTRRHEAAEPRPWKMGDSAPEYIDSMLRNIV
GIEIAVTSLVGKVKVSQNRELRDRLGAADTLEARGYGELAQSMRKAG

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322780, Length=163, Percent_Identity=33.7423312883436, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 23216; Mature: 23216

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIPAHFAENRPEELGRIIREHPLGMLVTQGSAGLDADHIPFEFDPGEGTHGVLTAHVAR
CCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEECCCCCCCCEEEEEHHH
ANPLWQRCPTGSPVMVVFRGAEAYISPNWYPSKHEAHRQVPTWNYEVVHAHGTITVHDDE
CCHHHHHCCCCCCEEEEEECCEEEECCCCCCCHHHHHCCCCCCCEEEEEECCEEEEECHH
RFVRRLVARLTRRHEAAEPRPWKMGDSAPEYIDSMLRNIVGIEIAVTSLVGKVKVSQNRE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
LRDRLGAADTLEARGYGELAQSMRKAG
HHHHCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MYIPAHFAENRPEELGRIIREHPLGMLVTQGSAGLDADHIPFEFDPGEGTHGVLTAHVAR
CCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEECCCCCCCCEEEEEHHH
ANPLWQRCPTGSPVMVVFRGAEAYISPNWYPSKHEAHRQVPTWNYEVVHAHGTITVHDDE
CCHHHHHCCCCCCEEEEEECCEEEECCCCCCCHHHHHCCCCCCCEEEEEECCEEEEECHH
RFVRRLVARLTRRHEAAEPRPWKMGDSAPEYIDSMLRNIVGIEIAVTSLVGKVKVSQNRE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
LRDRLGAADTLEARGYGELAQSMRKAG
HHHHCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]