| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116695900
Identifier: 116695900
GI number: 116695900
Start: 2216783
End: 2217700
Strand: Direct
Name: 116695900
Synonym: H16_B1964
Alternate gene names: NA
Gene position: 2216783-2217700 (Clockwise)
Preceding gene: 116695897
Following gene: 116695901
Centisome position: 76.11
GC content: 67.97
Gene sequence:
>918_bases ATGCCATTGATCACCCGCCGTACGCTGGCAGCCGCGCTGATGACTGCCAGCGGCTTCGCCTGCTACTGGACCTACCTGAC GCTCAACCAGGAACGGCTGCTGTTCGATGCACGCCGGCGTCCGCCGCGCGACCTGCCCGACGGCATCATTGGCTACTCGC ACCTGATCCCCGGCGGCGTGGTGCGCGGCTACATCTACCATAGCCCCGGCGACAACGTGCGCGACCTGCTGTTCTACCTG CCCGGGCGTGGCGAGGATGTGCTCGAAACGCTGCAGTACGCGCGCTGGCTGCCCGCCGGCATGGCCTTCGCCACCTATGA CTACCGCGGCCTGGGACACTCCGACGGCCTGCCGTCCGAGGGCGCCGCAGTGGCCGACGCCAGCCAGTTCCTGCTGCATG CGCGGCGTGTCTTCCCCGACACCCGGGTGCATGTGGTGGGCCGCAGCCTGGGCACCGGCGTCGCGATCCAGCTGGCGGAT CTGCAGGACTTCGACAGCCTGCAGCTGATCACGCCCTACGACTCGCTGCTTGAACTGGTGCGCAAGCGCTTCCCGCTGGT GCCGCTGCGCCAGCTGATGCGCCACCATTTCGATTCGATCTCGCATTGCAAGAAGGTCGTGCAGAGCACCAAGGTGCTGC TGGCCGAGACCGATGAAGTGGTGCCGCATGAATGCTCGGAACGGCTCATGGCTGCCTGGCCCGGCCCGGTGGCGTTGCAG ACCGTGCCAGCCACGAATCACTTCACCATTATCGAACGCGAGGAAACCTGGCTGGCGCTGTGCGAATTTGCCCGGCATCA CGGCCAGGCCAGGCTGCGCGTGGCTACAGCCCAGCCCGCACCGCCGGCCGCCACCGGCACGCCGCCCATCGACCATGACG AGCTCGGCAACCCGCTGCCGCTGGCGGCCGGCCGCTAG
Upstream 100 bases:
>100_bases GCTGCGCGCTCGCGCCTGACAAAAATGAGGTAGGCTGCGCGGCTGGGCGGCAAGGCCGGCGCTGGTGCGCCCCGCCTGGC AGCGACACTGAAGACTAGCC
Downstream 100 bases:
>100_bases CGCCAGTCAGGCAGCGGGTAAAATGCGCGCATGAAAAAAATCGCAGTCAAGGCAGGCGGCGCCGTACTGGCGCTGGCTGC AGCCGGTGCCTTGCTTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MPLITRRTLAAALMTASGFACYWTYLTLNQERLLFDARRRPPRDLPDGIIGYSHLIPGGVVRGYIYHSPGDNVRDLLFYL PGRGEDVLETLQYARWLPAGMAFATYDYRGLGHSDGLPSEGAAVADASQFLLHARRVFPDTRVHVVGRSLGTGVAIQLAD LQDFDSLQLITPYDSLLELVRKRFPLVPLRQLMRHHFDSISHCKKVVQSTKVLLAETDEVVPHECSERLMAAWPGPVALQ TVPATNHFTIIEREETWLALCEFARHHGQARLRVATAQPAPPAATGTPPIDHDELGNPLPLAAGR
Sequences:
>Translated_305_residues MPLITRRTLAAALMTASGFACYWTYLTLNQERLLFDARRRPPRDLPDGIIGYSHLIPGGVVRGYIYHSPGDNVRDLLFYL PGRGEDVLETLQYARWLPAGMAFATYDYRGLGHSDGLPSEGAAVADASQFLLHARRVFPDTRVHVVGRSLGTGVAIQLAD LQDFDSLQLITPYDSLLELVRKRFPLVPLRQLMRHHFDSISHCKKVVQSTKVLLAETDEVVPHECSERLMAAWPGPVALQ TVPATNHFTIIEREETWLALCEFARHHGQARLRVATAQPAPPAATGTPPIDHDELGNPLPLAAGR >Mature_304_residues PLITRRTLAAALMTASGFACYWTYLTLNQERLLFDARRRPPRDLPDGIIGYSHLIPGGVVRGYIYHSPGDNVRDLLFYLP GRGEDVLETLQYARWLPAGMAFATYDYRGLGHSDGLPSEGAAVADASQFLLHARRVFPDTRVHVVGRSLGTGVAIQLADL QDFDSLQLITPYDSLLELVRKRFPLVPLRQLMRHHFDSISHCKKVVQSTKVLLAETDEVVPHECSERLMAAWPGPVALQT VPATNHFTIIEREETWLALCEFARHHGQARLRVATAQPAPPAATGTPPIDHDELGNPLPLAAGR
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.pombe bem46 and yeast YNL320w [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 [H]
Pfam domain/function: PF01738 DLH [H]
EC number: NA
Molecular weight: Translated: 33851; Mature: 33720
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLITRRTLAAALMTASGFACYWTYLTLNQERLLFDARRRPPRDLPDGIIGYSHLIPGGV CCCCHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHH VRGYIYHSPGDNVRDLLFYLPGRGEDVLETLQYARWLPAGMAFATYDYRGLGHSDGLPSE HEEEEEECCCCCHHHHHEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC GAAVADASQFLLHARRVFPDTRVHVVGRSLGTGVAIQLADLQDFDSLQLITPYDSLLELV CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEECCHHHHHHHH RKRFPLVPLRQLMRHHFDSISHCKKVVQSTKVLLAETDEVVPHECSERLMAAWPGPVALQ HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCEEEE TVPATNHFTIIEREETWLALCEFARHHGQARLRVATAQPAPPAATGTPPIDHDELGNPLP EECCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHCCCCCC LAAGR CCCCC >Mature Secondary Structure PLITRRTLAAALMTASGFACYWTYLTLNQERLLFDARRRPPRDLPDGIIGYSHLIPGGV CCCHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHH VRGYIYHSPGDNVRDLLFYLPGRGEDVLETLQYARWLPAGMAFATYDYRGLGHSDGLPSE HEEEEEECCCCCHHHHHEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC GAAVADASQFLLHARRVFPDTRVHVVGRSLGTGVAIQLADLQDFDSLQLITPYDSLLELV CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEECCHHHHHHHH RKRFPLVPLRQLMRHHFDSISHCKKVVQSTKVLLAETDEVVPHECSERLMAAWPGPVALQ HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCEEEE TVPATNHFTIIEREETWLALCEFARHHGQARLRVATAQPAPPAATGTPPIDHDELGNPLP EECCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHCCCCCC LAAGR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]