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The map label for this gene is yhfA [H]

Identifier: 116695819

GI number: 116695819

Start: 2129306

End: 2130844

Strand: Direct

Name: yhfA [H]

Synonym: H16_B1883

Alternate gene names: 116695819

Gene position: 2129306-2130844 (Clockwise)

Preceding gene: 116695808

Following gene: 116695820

Centisome position: 73.11

GC content: 68.62

Gene sequence:

>1539_bases
ATGTCACAACAAGTCGTGATCGGTGCCGCGCACTGGATCTATCTGTCAGGGGTAGCAGTCATCGTGCTGACGATGATCCT
GCGCGCCAATGTTGTCGTGCCGTCGATCGTTGGCACCGCCCTGGTCGTGTTTGCGCTTACCGGCAGCCCGGTTTCGGCGC
TGGGCGGGGTGTTTTCCGCGAGCCTGGTTGCCGCCAAGGAGCTGTTCAATATCTTCCTTGTGATCGCGTTCATGACGGCG
CTGCTCAATGCGCTCAAAACGCTGCGCTCCGACATCCGCATGGTCGAGCCCTTCCGCGTGGTGATGAAGAACGGGCATTC
GGCGTTCTTTATCCTGGCGGGCATCACTTACGTCATCTCGCTGTTCTTCTGGCCAACCCCGGCCGTGCCGCTGGTCTCCG
CGATCCTGCTGCCGGCCGCTATCGCGGCGGGGCTGCCGCCGCTGGCGGGCGCGATGGCCATCGCCATCGCCGGCCAGGGC
ATGGCGCTGTCATCGGACTATGTGATCGGCGTCGCGCCCGGCATCAGCGCCAAGGCGGCCGGCGCGGCGGTGAGCGCCGC
GGTGGTGGCCGATCGCGCGCTGGCGCTGTCGATCATCACCGGCACGATTGCGCTGTGCCTGGCCTATCTGTCGATGCGCA
AGCATATCGTCCCCGCCTGCGGCACCCTGCTCGACCGCTGGCAGGCGCGCGCCAGCGGCAGCGCCGAGGCGCTGGAAGGC
GGCGGTACCTTCGACAAGGCCGAGATCGCCAGGGGCACCGCCCACGCCGAGCCGCTGGCCAGCGACAGCAATATCGAGGC
AAGCCTGGCGATGGTGGCCCGGCGCCGGGTGAAGTGGTCGAAATGCTTCGCGATCGTAACGCCGATTGCTTTCCTCGCAG
TGGTCGCCGTCATGGTGCTGCCCAAGCTGGGTACCGGCGTGCAGGACCTCAAGGGCGGCGATGCGGCTGCGCTGGTCGGC
GGCGTCGCGGCGGTGCTGATGATGCTGGCGACGCTGGCCGCGGAAGGCCCGCGCCGCATGCTCGACGTGTGCCCGGAGCA
CATCACCGACGGCTTTGTCTTTGCCTTCAAGGCGATGGGCTCGGTGTTGCCGATCGCGGGCTTTTTCTTCGTCGGCGCCG
GCGAAACCGCCGCGCAGATCCTGGGCCTGCCGCCGGGCAAGGCGCCGAGCCTGCTGTTCGAGCTGATCCAGGCCTACCAG
CACATGATCCCGGACAACCACGTGCTGGTCGCCTTCGGGGTGCTGCTGGTCGGCATGATCACCGGCATCGACGGCTCCGG
TTTCGCAGGGCTGCCGCTGACCGGCACGCTGGCCGGCGCGCTCGGCCCGGTGGTCGGCTTCGACCCCGCGACGCTGGCCG
CGGTGGGCCAGATGGGCGCGGTCTGGACCGGCGGCGGCACGCTGGTGGCGTGGTCGTCGCTGATCGCGGTGGCCGGCTTC
GCCCGCGTGCCGGTGCTGGACGCGGTGCGCGCGCTGCTGATCCCGGTGCTGATCGGGCTGGCATGCTCCACCGTCGCCGC
GATGGTGTTGTGGTCGTAG

Upstream 100 bases:

>100_bases
GTTGTCGCGAGATTGCATCGGAATATAGTATACCAACACCGGATTCCGAAGCTGAGAGGGAATCCGGGCCCCACAACCCC
TCCGCCCCAAGGGAGTCTTC

Downstream 100 bases:

>100_bases
GCGGCCGCAAGCAACAGCCAGGCCCCTCCGATTTTTTCGACAATTCATGAGGCCGGGCGGCCAGCCCGGCAGGAACCGCG
CCATGCCGACAGTCACTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MSQQVVIGAAHWIYLSGVAVIVLTMILRANVVVPSIVGTALVVFALTGSPVSALGGVFSASLVAAKELFNIFLVIAFMTA
LLNALKTLRSDIRMVEPFRVVMKNGHSAFFILAGITYVISLFFWPTPAVPLVSAILLPAAIAAGLPPLAGAMAIAIAGQG
MALSSDYVIGVAPGISAKAAGAAVSAAVVADRALALSIITGTIALCLAYLSMRKHIVPACGTLLDRWQARASGSAEALEG
GGTFDKAEIARGTAHAEPLASDSNIEASLAMVARRRVKWSKCFAIVTPIAFLAVVAVMVLPKLGTGVQDLKGGDAAALVG
GVAAVLMMLATLAAEGPRRMLDVCPEHITDGFVFAFKAMGSVLPIAGFFFVGAGETAAQILGLPPGKAPSLLFELIQAYQ
HMIPDNHVLVAFGVLLVGMITGIDGSGFAGLPLTGTLAGALGPVVGFDPATLAAVGQMGAVWTGGGTLVAWSSLIAVAGF
ARVPVLDAVRALLIPVLIGLACSTVAAMVLWS

Sequences:

>Translated_512_residues
MSQQVVIGAAHWIYLSGVAVIVLTMILRANVVVPSIVGTALVVFALTGSPVSALGGVFSASLVAAKELFNIFLVIAFMTA
LLNALKTLRSDIRMVEPFRVVMKNGHSAFFILAGITYVISLFFWPTPAVPLVSAILLPAAIAAGLPPLAGAMAIAIAGQG
MALSSDYVIGVAPGISAKAAGAAVSAAVVADRALALSIITGTIALCLAYLSMRKHIVPACGTLLDRWQARASGSAEALEG
GGTFDKAEIARGTAHAEPLASDSNIEASLAMVARRRVKWSKCFAIVTPIAFLAVVAVMVLPKLGTGVQDLKGGDAAALVG
GVAAVLMMLATLAAEGPRRMLDVCPEHITDGFVFAFKAMGSVLPIAGFFFVGAGETAAQILGLPPGKAPSLLFELIQAYQ
HMIPDNHVLVAFGVLLVGMITGIDGSGFAGLPLTGTLAGALGPVVGFDPATLAAVGQMGAVWTGGGTLVAWSSLIAVAGF
ARVPVLDAVRALLIPVLIGLACSTVAAMVLWS
>Mature_511_residues
SQQVVIGAAHWIYLSGVAVIVLTMILRANVVVPSIVGTALVVFALTGSPVSALGGVFSASLVAAKELFNIFLVIAFMTAL
LNALKTLRSDIRMVEPFRVVMKNGHSAFFILAGITYVISLFFWPTPAVPLVSAILLPAAIAAGLPPLAGAMAIAIAGQGM
ALSSDYVIGVAPGISAKAAGAAVSAAVVADRALALSIITGTIALCLAYLSMRKHIVPACGTLLDRWQARASGSAEALEGG
GTFDKAEIARGTAHAEPLASDSNIEASLAMVARRRVKWSKCFAIVTPIAFLAVVAVMVLPKLGTGVQDLKGGDAAALVGG
VAAVLMMLATLAAEGPRRMLDVCPEHITDGFVFAFKAMGSVLPIAGFFFVGAGETAAQILGLPPGKAPSLLFELIQAYQH
MIPDNHVLVAFGVLLVGMITGIDGSGFAGLPLTGTLAGALGPVVGFDPATLAAVGQMGAVWTGGGTLVAWSSLIAVAGFA
RVPVLDAVRALLIPVLIGLACSTVAAMVLWS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52125; Mature: 51993

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQQVVIGAAHWIYLSGVAVIVLTMILRANVVVPSIVGTALVVFALTGSPVSALGGVFSA
CCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
SLVAAKELFNIFLVIAFMTALLNALKTLRSDIRMVEPFRVVMKNGHSAFFILAGITYVIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LFFWPTPAVPLVSAILLPAAIAAGLPPLAGAMAIAIAGQGMALSSDYVIGVAPGISAKAA
HHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCEECCCEEEEECCCCCCHHH
GAAVSAAVVADRALALSIITGTIALCLAYLSMRKHIVPACGTLLDRWQARASGSAEALEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC
GGTFDKAEIARGTAHAEPLASDSNIEASLAMVARRRVKWSKCFAIVTPIAFLAVVAVMVL
CCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PKLGTGVQDLKGGDAAALVGGVAAVLMMLATLAAEGPRRMLDVCPEHITDGFVFAFKAMG
HHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHC
SVLPIAGFFFVGAGETAAQILGLPPGKAPSLLFELIQAYQHMIPDNHVLVAFGVLLVGMI
CHHHHHHHHEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
TGIDGSGFAGLPLTGTLAGALGPVVGFDPATLAAVGQMGAVWTGGGTLVAWSSLIAVAGF
HCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHH
ARVPVLDAVRALLIPVLIGLACSTVAAMVLWS
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQQVVIGAAHWIYLSGVAVIVLTMILRANVVVPSIVGTALVVFALTGSPVSALGGVFSA
CCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
SLVAAKELFNIFLVIAFMTALLNALKTLRSDIRMVEPFRVVMKNGHSAFFILAGITYVIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LFFWPTPAVPLVSAILLPAAIAAGLPPLAGAMAIAIAGQGMALSSDYVIGVAPGISAKAA
HHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCEECCCEEEEECCCCCCHHH
GAAVSAAVVADRALALSIITGTIALCLAYLSMRKHIVPACGTLLDRWQARASGSAEALEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC
GGTFDKAEIARGTAHAEPLASDSNIEASLAMVARRRVKWSKCFAIVTPIAFLAVVAVMVL
CCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PKLGTGVQDLKGGDAAALVGGVAAVLMMLATLAAEGPRRMLDVCPEHITDGFVFAFKAMG
HHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHC
SVLPIAGFFFVGAGETAAQILGLPPGKAPSLLFELIQAYQHMIPDNHVLVAFGVLLVGMI
CHHHHHHHHEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
TGIDGSGFAGLPLTGTLAGALGPVVGFDPATLAAVGQMGAVWTGGGTLVAWSSLIAVAGF
HCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHH
ARVPVLDAVRALLIPVLIGLACSTVAAMVLWS
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]