| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116695758
Identifier: 116695758
GI number: 116695758
Start: 2059741
End: 2060736
Strand: Direct
Name: 116695758
Synonym: H16_B1822
Alternate gene names: NA
Gene position: 2059741-2060736 (Clockwise)
Preceding gene: 116695756
Following gene: 116695759
Centisome position: 70.72
GC content: 68.88
Gene sequence:
>996_bases ATGCAGCGTCATTCCCGCCAGCGGCGTGCCATAGTTGCGGCGCTCGCCACCCTGCCTGCCTTGTGCGCCTGGTCCGCACC GGCCTGCGCGGCAGAGGCATTTCCTTCGCGTCCGATCCGGCTGGTGGTGCCCTTCACGCCCGGCGGCACCACTGACATCC TGGCGCGCCTGGTTGCGCAGAAGGCCGGCGAGGCGCTGGGCCAGCAGATCGTGGTCGACAACCGTCCGGGCGCGGGCGGC AACATCGGCGCTGAGGCCGTGGCGCGCAGTGCAGCTGACGGCTATACGCTGCTGATGGGCACGTTGGGCACGCAGGTGAC CAACCAGTTCATTTACCCGCGCATGCCGTACGACAGCACCCGGGACTTCGTGCCCGTGACGCTGGTCGCCAATTCCCCCA ACGTGCTGCTTGTCAACAGCACGCTGAACGCAAGGTCGGTGGGCGAACTGGTGACGCTGGCCAGGCGCGAGCCGGGCAAG ATCAACTATGCCTCGACCAGCACCGGCGGGTCGCCCCACCTGTCAGGCGAGTTGCTGAACATGATGGCGGGCGTCAGCAT GCAGCACGTGCCGTACAAAGGGGCCGCCCCCGCCATGACGGACCTGCTCGCGGGCCAGGTCAACCTGATGTTCGACAACC TGCCGTCCGCGCTCGCACAGATCCAGGCTGGCAAGGTGACGGCGCTGGCGGTCACCAGTGCCAGGCGGGCCTCGGTGCTG CCTTCCGTGCCGACCGTGCGCGAGTCGGGGCTGCCGGGCTATGAAGTCAATTCCTGGTTCGGGCTGCTCGCGCCGGCCGG CACGCCGCCCGAGCGCGTGCGCCGGCTCCAGCAGGCGGTGGACAAGGTGCTGGCCACGCCCGACGTGCGCAAGCGCATCG AACAGCTTGGCGCCGAGCCGGGCGGCGAAGGCTCCGCCGCGTTCGCGGCGCAGATCAGGAGCGATACGGAAAAATGGTCG CGCGTGATCCAGACCGCCGGCATCAAGCCGCAATGA
Upstream 100 bases:
>100_bases TTTGACGCTCGTTCGCTCCCCTCCCTAAGATCTCCCGCACAGAGTTTCCCTCAACGAAACCAGATGCGCGCGCACCGCCT CGCGCCCAGGAGACAACCCG
Downstream 100 bases:
>100_bases CGCGGCTGGGCAGCGCCAACCCCTGACACAGGACAATCATGACCAAGACCAACACCCTTCGCATCGGCTCGGGATCGGGC TGGTGGGGCGACCGCGTCGA
Product: extra-cytoplasmic solute receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MQRHSRQRRAIVAALATLPALCAWSAPACAAEAFPSRPIRLVVPFTPGGTTDILARLVAQKAGEALGQQIVVDNRPGAGG NIGAEAVARSAADGYTLLMGTLGTQVTNQFIYPRMPYDSTRDFVPVTLVANSPNVLLVNSTLNARSVGELVTLARREPGK INYASTSTGGSPHLSGELLNMMAGVSMQHVPYKGAAPAMTDLLAGQVNLMFDNLPSALAQIQAGKVTALAVTSARRASVL PSVPTVRESGLPGYEVNSWFGLLAPAGTPPERVRRLQQAVDKVLATPDVRKRIEQLGAEPGGEGSAAFAAQIRSDTEKWS RVIQTAGIKPQ
Sequences:
>Translated_331_residues MQRHSRQRRAIVAALATLPALCAWSAPACAAEAFPSRPIRLVVPFTPGGTTDILARLVAQKAGEALGQQIVVDNRPGAGG NIGAEAVARSAADGYTLLMGTLGTQVTNQFIYPRMPYDSTRDFVPVTLVANSPNVLLVNSTLNARSVGELVTLARREPGK INYASTSTGGSPHLSGELLNMMAGVSMQHVPYKGAAPAMTDLLAGQVNLMFDNLPSALAQIQAGKVTALAVTSARRASVL PSVPTVRESGLPGYEVNSWFGLLAPAGTPPERVRRLQQAVDKVLATPDVRKRIEQLGAEPGGEGSAAFAAQIRSDTEKWS RVIQTAGIKPQ >Mature_331_residues MQRHSRQRRAIVAALATLPALCAWSAPACAAEAFPSRPIRLVVPFTPGGTTDILARLVAQKAGEALGQQIVVDNRPGAGG NIGAEAVARSAADGYTLLMGTLGTQVTNQFIYPRMPYDSTRDFVPVTLVANSPNVLLVNSTLNARSVGELVTLARREPGK INYASTSTGGSPHLSGELLNMMAGVSMQHVPYKGAAPAMTDLLAGQVNLMFDNLPSALAQIQAGKVTALAVTSARRASVL PSVPTVRESGLPGYEVNSWFGLLAPAGTPPERVRRLQQAVDKVLATPDVRKRIEQLGAEPGGEGSAAFAAQIRSDTEKWS RVIQTAGIKPQ
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34821; Mature: 34821
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRHSRQRRAIVAALATLPALCAWSAPACAAEAFPSRPIRLVVPFTPGGTTDILARLVAQ CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHH KAGEALGQQIVVDNRPGAGGNIGAEAVARSAADGYTLLMGTLGTQVTNQFIYPRMPYDST HHHHHHCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCC RDFVPVTLVANSPNVLLVNSTLNARSVGELVTLARREPGKINYASTSTGGSPHLSGELLN CCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHH MMAGVSMQHVPYKGAAPAMTDLLAGQVNLMFDNLPSALAQIQAGKVTALAVTSARRASVL HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHCC PSVPTVRESGLPGYEVNSWFGLLAPAGTPPERVRRLQQAVDKVLATPDVRKRIEQLGAEP CCCCCHHHCCCCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC GGEGSAAFAAQIRSDTEKWSRVIQTAGIKPQ CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQRHSRQRRAIVAALATLPALCAWSAPACAAEAFPSRPIRLVVPFTPGGTTDILARLVAQ CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHH KAGEALGQQIVVDNRPGAGGNIGAEAVARSAADGYTLLMGTLGTQVTNQFIYPRMPYDST HHHHHHCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCC RDFVPVTLVANSPNVLLVNSTLNARSVGELVTLARREPGKINYASTSTGGSPHLSGELLN CCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHH MMAGVSMQHVPYKGAAPAMTDLLAGQVNLMFDNLPSALAQIQAGKVTALAVTSARRASVL HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHCC PSVPTVRESGLPGYEVNSWFGLLAPAGTPPERVRRLQQAVDKVLATPDVRKRIEQLGAEP CCCCCHHHCCCCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC GGEGSAAFAAQIRSDTEKWSRVIQTAGIKPQ CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]