| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116695688
Identifier: 116695688
GI number: 116695688
Start: 1990669
End: 1991622
Strand: Direct
Name: 116695688
Synonym: H16_B1752
Alternate gene names: NA
Gene position: 1990669-1991622 (Clockwise)
Preceding gene: 116695687
Following gene: 116695691
Centisome position: 68.35
GC content: 57.65
Gene sequence:
>954_bases ATGAAAAATTCGATCGCGCTGCTGTTCTGTGCATTGGTCACCACAGTCTCGATGCCGTCTCACGCCAATGACAGCACGAC GCCCCGTCGCCTCATCGTTCCCTATACCGCGGGCGGAGGCAGCGACACGCTTTCCAGGGCAATCGGCCAGAAGCTTTCTC AGGTACTGGGCGAACCTGTTGTCGTTGAAAACCGGCCCGGGGCAAACGGCTACATTGCCGCTGGCGTTGTCGCCAAGAGC CCACCAGACGGCCGTACCTTGCTTGTCGGCGGCAATGCGCTGATTATCGGGCCGATGTTGTACTCATCGCACAAGCTTAA TGCGTTGAAGGATTTCACTCCTATTTCCAGTCTGGTCAGAGTGACTCTTGTACTGGTCAGTAGTCCGGGCCTTCCGGCCA ACAATGGCCGAGAATTTGTCCAGATGGCGCGAAAAGAGAAAGGCCTGAGCTACGCCTCGCCGTCGCCGGGCATCATGTTT GCGACCGAGCAAATCAAGGCGCTGGCCGGTTTCGACCTGATGCGCGTGTCGTACCGTGGCGCACCGGAAGGCTTTATCGA TGTGACTTCTGGAAGGGTATCCGTGATGTTTGACAGCGTTGCCGCGGAGCTGCCAAACATCAGATCGGGTCGCGCCAAGG CTCTTTTGGTTACCGGCGAAAACCGCCACCCTCTCCTTCCGGACGTACCGACGCTTGCTGAATCTGGCATCCCAGGCTAC GTAGAGGACAACTATATCGGCATACTTGGTCCGGCCGGCATGGATCCGCACGTCGTCGATACACTGAACGCCGCATTGCT CAAGGTCCTCCGAGACCCTGAATTCAAGGCCTTTGCAGAAAGGCTGGGATTTCTCCCTTCACCTGCATCTCCCAAGGCCT TCCGGGATATGCTCGGCGCGACCACAACGCGGTACCAACAGATTGCCAATCAGCTCGACCTCAAGCCGGAATAG
Upstream 100 bases:
>100_bases CACTTCACACAGATGAAGACCATCCTCGTGAATCTCGCATAGCACCAGCGGCGCCGCAGGCGCCGCTCTGCCTCAGAAAA TCATTAAGGAGACACCGGTC
Downstream 100 bases:
>100_bases AGAAGCCACATGCATTGGTGCGAATAGCCTGACGTGTCTGTCCCCGGGCACATCGGCTCGGGGCCGCGCTGGGCGCAAGC CGTGCGGCCCCGAAATCGAG
Product: extra-cytoplasmic solute receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MKNSIALLFCALVTTVSMPSHANDSTTPRRLIVPYTAGGGSDTLSRAIGQKLSQVLGEPVVVENRPGANGYIAAGVVAKS PPDGRTLLVGGNALIIGPMLYSSHKLNALKDFTPISSLVRVTLVLVSSPGLPANNGREFVQMARKEKGLSYASPSPGIMF ATEQIKALAGFDLMRVSYRGAPEGFIDVTSGRVSVMFDSVAAELPNIRSGRAKALLVTGENRHPLLPDVPTLAESGIPGY VEDNYIGILGPAGMDPHVVDTLNAALLKVLRDPEFKAFAERLGFLPSPASPKAFRDMLGATTTRYQQIANQLDLKPE
Sequences:
>Translated_317_residues MKNSIALLFCALVTTVSMPSHANDSTTPRRLIVPYTAGGGSDTLSRAIGQKLSQVLGEPVVVENRPGANGYIAAGVVAKS PPDGRTLLVGGNALIIGPMLYSSHKLNALKDFTPISSLVRVTLVLVSSPGLPANNGREFVQMARKEKGLSYASPSPGIMF ATEQIKALAGFDLMRVSYRGAPEGFIDVTSGRVSVMFDSVAAELPNIRSGRAKALLVTGENRHPLLPDVPTLAESGIPGY VEDNYIGILGPAGMDPHVVDTLNAALLKVLRDPEFKAFAERLGFLPSPASPKAFRDMLGATTTRYQQIANQLDLKPE >Mature_317_residues MKNSIALLFCALVTTVSMPSHANDSTTPRRLIVPYTAGGGSDTLSRAIGQKLSQVLGEPVVVENRPGANGYIAAGVVAKS PPDGRTLLVGGNALIIGPMLYSSHKLNALKDFTPISSLVRVTLVLVSSPGLPANNGREFVQMARKEKGLSYASPSPGIMF ATEQIKALAGFDLMRVSYRGAPEGFIDVTSGRVSVMFDSVAAELPNIRSGRAKALLVTGENRHPLLPDVPTLAESGIPGY VEDNYIGILGPAGMDPHVVDTLNAALLKVLRDPEFKAFAERLGFLPSPASPKAFRDMLGATTTRYQQIANQLDLKPE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33621; Mature: 33621
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSIALLFCALVTTVSMPSHANDSTTPRRLIVPYTAGGGSDTLSRAIGQKLSQVLGEPV CCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCE VVENRPGANGYIAAGVVAKSPPDGRTLLVGGNALIIGPMLYSSHKLNALKDFTPISSLVR EEECCCCCCCEEEEEEEECCCCCCCEEEEECCEEEEECHHHCCCCCHHHHHHHHHHHHHH VTLVLVSSPGLPANNGREFVQMARKEKGLSYASPSPGIMFATEQIKALAGFDLMRVSYRG HHHHEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHCCCEEEEECCC APEGFIDVTSGRVSVMFDSVAAELPNIRSGRAKALLVTGENRHPLLPDVPTLAESGIPGY CCCCEEEECCCEEEEEEHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCC VEDNYIGILGPAGMDPHVVDTLNAALLKVLRDPEFKAFAERLGFLPSPASPKAFRDMLGA CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHCC TTTRYQQIANQLDLKPE HHHHHHHHHHHCCCCCC >Mature Secondary Structure MKNSIALLFCALVTTVSMPSHANDSTTPRRLIVPYTAGGGSDTLSRAIGQKLSQVLGEPV CCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCE VVENRPGANGYIAAGVVAKSPPDGRTLLVGGNALIIGPMLYSSHKLNALKDFTPISSLVR EEECCCCCCCEEEEEEEECCCCCCCEEEEECCEEEEECHHHCCCCCHHHHHHHHHHHHHH VTLVLVSSPGLPANNGREFVQMARKEKGLSYASPSPGIMFATEQIKALAGFDLMRVSYRG HHHHEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHCCCEEEEECCC APEGFIDVTSGRVSVMFDSVAAELPNIRSGRAKALLVTGENRHPLLPDVPTLAESGIPGY CCCCEEEECCCEEEEEEHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCC VEDNYIGILGPAGMDPHVVDTLNAALLKVLRDPEFKAFAERLGFLPSPASPKAFRDMLGA CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHCC TTTRYQQIANQLDLKPE HHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]