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The map label for this gene is prtR

Identifier: 116695665

GI number: 116695665

Start: 1963834

End: 1964592

Strand: Direct

Name: prtR

Synonym: H16_B1728

Alternate gene names: NA

Gene position: 1963834-1964592 (Clockwise)

Preceding gene: 116695664

Following gene: 116695666

Centisome position: 67.43

GC content: 61.53

Gene sequence:

>759_bases
ATGAAGATGCTCATTCCCACCGAACCCGAACTCCATGCCTATGTCGATGGCGAGCTGGATGAAACGCGGAGACGGCAGAT
CGAGAGCCTGATAGCCAGCCAGCCCGAATTGGCGCGGCAAGCTGAGCAGATCCGGCAGGAGTCACAGCGATTGCGCGCAA
GCATGGAGCCTCCGCCGGCCGATACGCCAGTACGGCTCGATCCATTCCGTATTCGTCGCGAGTTGCGCGATCGCATGCGG
CACCGGGTGGCCGTAGCGGCGTCCCTGGTGCTGGCCTTGACCGTGGGTGGTATGGGTGGCTGGCAAACGCGTGAGATCGC
CTTCCAGCAGAACTATCTGCCAATGGCCGACGCGATGTCGGCCTACCGGCTGTTCGCTGTCAGCGACACACCGCAGATGG
TGGACGTGAAGACCAGTGATCCACGTCAGTTGCAGACCTGGCTGGACCAGCATTTCGTGCAGCCGGCACCGTTGCCCGAT
TTCTCATCATACGGATTTCGGCCGGTCAGTGGTCGCCTGATGTCATCGGAACAGGGCACGGCGGCAATGATCCTCTACCA
GAACCAGAAGATGGAGTCGATCGTCTACTACGTACGGCCGCCCGGCAATCTGCTGCATTTCAGCAACGGCGCGCGCAAGG
AGGGGAACCTGCTCGCCCAGTACTGGCGTAACGGCCGCTATTTCTATGCGGTGGTTAGCGCCACCGATACACCGACGACA
TTGCCGGTACAGCGCGCCCTCGAGCCGGGCAGGATCTGA

Upstream 100 bases:

>100_bases
TGCCGATCGGCACCATCATGTCGCGCATATCGCGGGCCCGGAAGACGCTGCGCGAATTTTCCGAAGGCAGGGTCGTCCCT
CCCTCCATGCAGGTCCTCAA

Downstream 100 bases:

>100_bases
AAAATGTTGATGGCGACGGAATAACGACCCTGGCATGTTCGTCTGACTGGAACACAACGCATGACTGCTCCATGCATGTG
ATCTCAAACTGAAAGGATCG

Product: transmembrane activator of PrtI

Products: NA

Alternate protein names: Transmembrane Transcriptional Regulator; Transmembrane Regulator PrtR; Anti-Sigma Factor; Transmembrane Regulator; PrtR Transmembrane Transcriptional Regulator; Transcriptional Regulator; Transmembrane Protein; Transmembrane Activator Of PrtI; Transmembrane Transcription Activator Of PrtI; Transmembrane Regulatory Protein; Transmembrane Regulator Protein PrtR

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKMLIPTEPELHAYVDGELDETRRRQIESLIASQPELARQAEQIRQESQRLRASMEPPPADTPVRLDPFRIRRELRDRMR
HRVAVAASLVLALTVGGMGGWQTREIAFQQNYLPMADAMSAYRLFAVSDTPQMVDVKTSDPRQLQTWLDQHFVQPAPLPD
FSSYGFRPVSGRLMSSEQGTAAMILYQNQKMESIVYYVRPPGNLLHFSNGARKEGNLLAQYWRNGRYFYAVVSATDTPTT
LPVQRALEPGRI

Sequences:

>Translated_252_residues
MKMLIPTEPELHAYVDGELDETRRRQIESLIASQPELARQAEQIRQESQRLRASMEPPPADTPVRLDPFRIRRELRDRMR
HRVAVAASLVLALTVGGMGGWQTREIAFQQNYLPMADAMSAYRLFAVSDTPQMVDVKTSDPRQLQTWLDQHFVQPAPLPD
FSSYGFRPVSGRLMSSEQGTAAMILYQNQKMESIVYYVRPPGNLLHFSNGARKEGNLLAQYWRNGRYFYAVVSATDTPTT
LPVQRALEPGRI
>Mature_252_residues
MKMLIPTEPELHAYVDGELDETRRRQIESLIASQPELARQAEQIRQESQRLRASMEPPPADTPVRLDPFRIRRELRDRMR
HRVAVAASLVLALTVGGMGGWQTREIAFQQNYLPMADAMSAYRLFAVSDTPQMVDVKTSDPRQLQTWLDQHFVQPAPLPD
FSSYGFRPVSGRLMSSEQGTAAMILYQNQKMESIVYYVRPPGNLLHFSNGARKEGNLLAQYWRNGRYFYAVVSATDTPTT
LPVQRALEPGRI

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28735; Mature: 28735

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMLIPTEPELHAYVDGELDETRRRQIESLIASQPELARQAEQIRQESQRLRASMEPPPA
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
DTPVRLDPFRIRRELRDRMRHRVAVAASLVLALTVGGMGGWQTREIAFQQNYLPMADAMS
CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEHHCCCCCHHHHHH
AYRLFAVSDTPQMVDVKTSDPRQLQTWLDQHFVQPAPLPDFSSYGFRPVSGRLMSSEQGT
HHEEEEECCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCC
AAMILYQNQKMESIVYYVRPPGNLLHFSNGARKEGNLLAQYWRNGRYFYAVVSATDTPTT
EEEEEEECCCCCEEEEEECCCCCEEECCCCCCCCCHHHHHHHHCCEEEEEEEECCCCCCC
LPVQRALEPGRI
CCHHHCCCCCCC
>Mature Secondary Structure
MKMLIPTEPELHAYVDGELDETRRRQIESLIASQPELARQAEQIRQESQRLRASMEPPPA
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
DTPVRLDPFRIRRELRDRMRHRVAVAASLVLALTVGGMGGWQTREIAFQQNYLPMADAMS
CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEHHCCCCCHHHHHH
AYRLFAVSDTPQMVDVKTSDPRQLQTWLDQHFVQPAPLPDFSSYGFRPVSGRLMSSEQGT
HHEEEEECCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCC
AAMILYQNQKMESIVYYVRPPGNLLHFSNGARKEGNLLAQYWRNGRYFYAVVSATDTPTT
EEEEEEECCCCCEEEEEECCCCCEEECCCCCCCCCHHHHHHHHCCEEEEEEEECCCCCCC
LPVQRALEPGRI
CCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA